RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 AREL1O15033 823 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 KIAA0391O15091 583 aaKnown RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 HOXA3O43365 443 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 CHEK2O96017 543 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 MT-ND5P03915 603 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 KLRC1P26715 233 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 RIN1Q13671 783 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 ELF2Q15723 593 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 BHLHE22Q8NFJ8 381 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 SLC35B2Q8TB61 432 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 IPCEF1Q8WWN9 437 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 SCAMP4Q969E2 229 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF566Q969W8 418 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 NAP1L4Q99733 375 aaKnown RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 TCF25Q9BQ70 676 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 MAF1Q9H063 256 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 SIK2Q9H0K1 926 aa6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 A1CFQ9NQ94 594 aaKnown RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 SMG5Q9UPR3 1016 aaKnown RBP6.38□□□□□ -1.39
HMGB1P46-201ENST00000520062 A0A087WWL8 130 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TCRBV7S2A1N4TA0A589 114 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TBKBP1A7MCY6 615 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 MATN2O00339 956 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 SKAP2O75563 359 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 POMCP01189 267 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 CSTBP04080 98 aaKnown RBP6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 KRT1P04264 644 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TAL1P17542 331 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 SLC6A4P31645 630 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 ALDH9A1P49189 494 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 RENBPP51606 427 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 AFF3P51826 1226 aaKnown RBP6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 RAC3P60763 192 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 CTBP1Q13363 440 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 BIRC3Q13489 604 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 RALBP1Q15311 655 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 BMT2Q1RMZ1 405 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 CCDC38Q502W7 563 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TMEM151BQ8IW70 566 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TXLNBQ8N3L3 684 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 SHCBP1Q8NEM2 672 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 MYLK2Q9H1R3 596 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 NELFAQ9H3P2 528 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 TM7SF3Q9NS93 570 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 GTF2A1LQ9UNN4 478 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 CLCA2Q9UQC9 943 aa6.37□□□□□ -1.39
HMGB1P46-201ENST00000520062 PNPLA7Q6ZV29 1317 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 A0A1B0GTL3 188 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 A0A1W2PRX2 142 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 PYCARD-AS1I3L0S3 204 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 DNAJB5O75953 348 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 HSD3B1P14060 373 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 TCF15Q12870 199 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 DUSP8Q13202 625 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 BORAQ6PGQ7 559 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 PLEKHH3Q7Z736 793 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 ADGRG2Q8IZP9 1017 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZFP28Q8NHY6 868 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 SEC61A2Q9H9S3 476 aa6.36□□□□□ -1.39
HMGB1P46-201ENST00000520062 FARP2O94887 1054 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 UNC5CO95185 931 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 CNOT4O95628 575 aaKnown RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 TSPAN15O95858 294 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 TXNP10599 105 aaKnown RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 MYL4P12829 197 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 IL1R1P14778 569 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 PHKA1P46020 1223 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 SLC11A2P49281 568 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 LINC00310P59036 64 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 FSTL1Q12841 308 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 UBXN2BQ14CS0 331 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZACNQ401N2 412 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 ALFQ53S48 1182 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 MFSD5Q6N075 450 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 FAM111BQ6SJ93 734 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 UNC13DQ70J99 1090 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 RNF44Q7L0R7 432 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 FAM83AQ86UY5 434 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 CACNA2D3Q8IZS8 1091 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 FAM9AQ8IZU1 332 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 MYCT1Q8N699 235 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 DNAJC5GQ8N7S2 189 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 TP53I13Q8NBR0 393 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 TRIM63Q969Q1 353 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 NEIL1Q96FI4 390 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 TINAGL1Q9GZM7 467 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 EPC1Q9H2F5 836 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 PGAP2Q9UHJ9 254 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 ANAPC4Q9UJX5 808 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 OAZ3Q9UMX2 235 aa6.35□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF785A8K8V0 405 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms