RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 SETD1BQ9UPS6 1966 aaKnown RBP2.55□□□□□ -2
CCNC-208ENST00000519617 SIK3Q9Y2K2 1263 aa2.55□□□□□ -2
CCNC-208ENST00000519617 NOC2LQ9Y3T9 749 aaKnown RBP2.55□□□□□ -2
CCNC-208ENST00000519617 EID1Q9Y6B2 187 aa2.55□□□□□ -2
CCNC-208ENST00000519617 KIDINS220Q9ULH0 1771 aa2.54□□□□□ -2
CCNC-208ENST00000519617 BCORL1Q5H9F3 1711 aa2.54□□□□□ -2
CCNC-208ENST00000519617 DIP2CQ9Y2E4 1556 aa2.54□□□□□ -2
CCNC-208ENST00000519617 LMTK2Q8IWU2 1503 aa2.54□□□□□ -2
CCNC-208ENST00000519617 NPATQ14207 1427 aa2.54□□□□□ -2
CCNC-208ENST00000519617 AOX1Q06278 1338 aa2.54□□□□□ -2
CCNC-208ENST00000519617 MPPED1O15442 326 aa2.54□□□□□ -2
CCNC-208ENST00000519617 AKR1B10O60218 316 aa2.54□□□□□ -2
CCNC-208ENST00000519617 FKBP9O95302 570 aa2.54□□□□□ -2
CCNC-208ENST00000519617 PRKCGP05129 697 aa2.54□□□□□ -2
CCNC-208ENST00000519617 IL2RBP14784 551 aa2.54□□□□□ -2
CCNC-208ENST00000519617 HOXB6P17509 224 aaKnown RBP2.54□□□□□ -2
CCNC-208ENST00000519617 ATP5JP18859 108 aa2.54□□□□□ -2
CCNC-208ENST00000519617 GPD1P21695 349 aa2.54□□□□□ -2
CCNC-208ENST00000519617 SLC6A2P23975 617 aa2.54□□□□□ -2
CCNC-208ENST00000519617 ADSLP30566 484 aaPredicted RBP2.54□□□□□ -2
CCNC-208ENST00000519617 SREBF1P36956 1147 aa2.54□□□□□ -2
CCNC-208ENST00000519617 ADCYAP1R1P41586 468 aa2.54□□□□□ -2
CCNC-208ENST00000519617 PDCD1Q15116 288 aa2.54□□□□□ -2
CCNC-208ENST00000519617 TCEA2Q15560 299 aa2.54□□□□□ -2
CCNC-208ENST00000519617 SEPT7Q16181 437 aaKnown RBP2.54□□□□□ -2
CCNC-208ENST00000519617 FSCN1Q16658 493 aaKnown RBP2.54□□□□□ -2
CCNC-208ENST00000519617 UGT8Q16880 541 aa2.54□□□□□ -2
CCNC-208ENST00000519617 C11orf87Q6NUJ2 197 aa2.54□□□□□ -2
CCNC-208ENST00000519617 VWA1Q6PCB0 445 aa2.54□□□□□ -2
CCNC-208ENST00000519617 FKBP9P1Q75LS8 142 aa2.54□□□□□ -2
CCNC-208ENST00000519617 C11orf74Q86VG3 221 aa2.54□□□□□ -2
CCNC-208ENST00000519617 AHI1Q8N157 1196 aa2.54□□□□□ -2
CCNC-208ENST00000519617 Q8NA96 180 aa2.54□□□□□ -2
CCNC-208ENST00000519617 SSH3Q8TE77 659 aa2.54□□□□□ -2
CCNC-208ENST00000519617 SLC5A5Q92911 643 aa2.54□□□□□ -2
CCNC-208ENST00000519617 EAF2Q96CJ1 260 aaPredicted RBP2.54□□□□□ -2
CCNC-208ENST00000519617 RAX2Q96IS3 184 aa2.54□□□□□ -2
CCNC-208ENST00000519617 MED15Q96RN5 788 aa2.54□□□□□ -2
CCNC-208ENST00000519617 CPNE5Q9HCH3 593 aa2.54□□□□□ -2
CCNC-208ENST00000519617 FLRT1Q9NZU1 646 aa2.54□□□□□ -2
CCNC-208ENST00000519617 MTO1Q9Y2Z2 717 aaKnown RBP2.54□□□□□ -2
CCNC-208ENST00000519617 ABCA6Q8N139 1617 aa2.53□□□□□ -2
CCNC-208ENST00000519617 RNF17Q9BXT8 1623 aaKnown RBP2.53□□□□□ -2
CCNC-208ENST00000519617 PRDM15P57071 1507 aaPredicted RBP2.53□□□□□ -2
CCNC-208ENST00000519617 NLRP1Q9C000 1473 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PTPRKQ15262 1439 aa2.53□□□□□ -2
CCNC-208ENST00000519617 YEATS2Q9ULM3 1422 aa2.53□□□□□ -2
CCNC-208ENST00000519617 ARHGEF17Q96PE2 2063 aaPredicted RBP2.53□□□□□ -2
CCNC-208ENST00000519617 ANKRD30BQ9BXX2 1392 aa2.53□□□□□ -2
CCNC-208ENST00000519617 ZNF804BA4D1E1 1349 aa2.53□□□□□ -2
CCNC-208ENST00000519617 MANSC4A6NHS7 340 aaPredicted RBP2.53□□□□□ -2
CCNC-208ENST00000519617 YY2O15391 372 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PROM1O43490 865 aa2.53□□□□□ -2
CCNC-208ENST00000519617 ORC4O43929 436 aa2.53□□□□□ -2
CCNC-208ENST00000519617 SRGNP10124 158 aa2.53□□□□□ -2
CCNC-208ENST00000519617 ITPKBP27987 946 aa2.53□□□□□ -2
CCNC-208ENST00000519617 ECHS1P30084 290 aa2.53□□□□□ -2
CCNC-208ENST00000519617 GUCY1A2P33402 732 aa2.53□□□□□ -2
CCNC-208ENST00000519617 GRIA3P42263 894 aa2.53□□□□□ -2
CCNC-208ENST00000519617 KRTAP10-6P60371 365 aaPredicted RBP2.53□□□□□ -2
CCNC-208ENST00000519617 IL2P60568 153 aa2.53□□□□□ -2
CCNC-208ENST00000519617 SF3B3Q15393 1217 aaKnown RBP2.53□□□□□ -2
CCNC-208ENST00000519617 EZH2Q15910 746 aaKnown RBP2.53□□□□□ -2
CCNC-208ENST00000519617 SRSF7Q16629 238 aaKnown RBP eCLIP2.53□□□□□ -2
CCNC-208ENST00000519617 GEN1Q17RS7 908 aa2.53□□□□□ -2
CCNC-208ENST00000519617 NBPF8Q3BBV2 869 aa2.53□□□□□ -2
CCNC-208ENST00000519617 CNNM4Q6P4Q7 775 aa2.53□□□□□ -2
CCNC-208ENST00000519617 FAM180AQ6UWF9 173 aa2.53□□□□□ -2
CCNC-208ENST00000519617 SEM1Q6ZVN7 128 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PQLC1Q8N2U9 271 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PPM1KQ8N3J5 372 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PDPRQ8NCN5 879 aa2.53□□□□□ -2
CCNC-208ENST00000519617 FBXO18Q8NFZ0 1043 aa2.53□□□□□ -2
CCNC-208ENST00000519617 OR2W6PQ8NHA6 318 aa2.53□□□□□ -2
CCNC-208ENST00000519617 NUP133Q8WUM0 1156 aa2.53□□□□□ -2
CCNC-208ENST00000519617 DDB2Q92466 427 aa2.53□□□□□ -2
CCNC-208ENST00000519617 HOXB13Q92826 284 aaPredicted RBP2.53□□□□□ -2
CCNC-208ENST00000519617 NINJ1Q92982 152 aa2.53□□□□□ -2
CCNC-208ENST00000519617 MARS2Q96GW9 593 aaKnown RBP2.53□□□□□ -2
CCNC-208ENST00000519617 MRFAP1L1Q96HT8 127 aa2.53□□□□□ -2
CCNC-208ENST00000519617 PNKPQ96T60 521 aa2.53□□□□□ -2
CCNC-208ENST00000519617 EMC7Q9NPA0 242 aa2.53□□□□□ -2
CCNC-208ENST00000519617 FBXO34Q9NWN3 711 aa2.53□□□□□ -2
CCNC-208ENST00000519617 HSFX1Q9UBD0 423 aa2.53□□□□□ -2
CCNC-208ENST00000519617 SLC23A1Q9UHI7 598 aa2.53□□□□□ -2
CCNC-208ENST00000519617 DPP7Q9UHL4 492 aa2.53□□□□□ -2
CCNC-208ENST00000519617 SCOCQ9UIL1 159 aa2.53□□□□□ -2
CCNC-208ENST00000519617 CD2APQ9Y5K6 639 aa2.53□□□□□ -2
CCNC-208ENST00000519617 MROH2AA6NES4 1674 aa2.53□□□□□ -2
CCNC-208ENST00000519617 TET3O43151 1660 aa2.53□□□□□ -2
CCNC-208ENST00000519617 DEPDC5O75140 1603 aa2.53□□□□□ -2
CCNC-208ENST00000519617 IQGAP3Q86VI3 1631 aa2.53□□□□□ -2
CCNC-208ENST00000519617 UNC13BO14795 1591 aa2.53□□□□□ -2.01
CCNC-208ENST00000519617 FRMPD1Q5SYB0 1578 aa2.53□□□□□ -2.01
CCNC-208ENST00000519617 PZPP20742 1482 aa2.52□□□□□ -2.01
CCNC-208ENST00000519617 UHRF1BP1Q6BDS2 1440 aa2.52□□□□□ -2.01
CCNC-208ENST00000519617 TNRQ92752 1358 aa2.52□□□□□ -2.01
CCNC-208ENST00000519617 TRGV11A0A075B6L2 103 aa2.52□□□□□ -2.01
CCNC-208ENST00000519617 GSG1L2A8MUP6 293 aa2.52□□□□□ -2.01
CCNC-208ENST00000519617 ELFN1P0C7U0 828 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms