RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MIIPQ5JXC2 388 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 CCSAPQ6IQ19 270 aaPredicted RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 DARS2Q6PI48 645 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 OR56A1Q8NGH5 318 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 CACTINQ8WUQ7 758 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF503Q96F45 646 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 PHACTR3Q96KR7 559 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 MRGPRX1Q96LB2 322 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 KLHL32Q96NJ5 620 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 ARMT1Q9H993 441 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 RSAD1Q9HA92 442 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 PIH1D1Q9NWS0 290 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 TRPM5Q9NZQ8 1165 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 FPGT-TNNI3KV9GXZ4 949 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 A0A1B0GTW7 788 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 A0A1W2PPL8 197 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 GOLIM4O00461 696 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 AHSGP02765 367 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 GNAI2P04899 355 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 CFIP05156 583 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 HLA-DOAP06340 250 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 BMPR1AP36894 532 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 POU6F2P78424 691 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 SLC25A3Q00325 362 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 PURAQ00577 322 aaKnown RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 LLGL1Q15334 1064 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 RNF220Q5VTB9 566 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 CCDC149Q6ZUS6 474 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 FAM156AQ8NDB6 213 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 SH3RF3Q8TEJ3 882 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 SLC25A43Q8WUT9 341 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 KBTBD7Q8WVZ9 684 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 ANKS1AQ92625 1134 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 SARGQ9BW04 601 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 C22orf23Q9BZE7 217 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 ZMAT3Q9HA38 289 aaKnown RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 ATP6V0A4Q9HBG4 840 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.64□□□□□ -1.67
VPS13B-207ENST00000518569 SLC45A2Q9UMX9 530 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 MED16Q9Y2X0 877 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 NEU2Q9Y3R4 380 aa4.64□□□□□ -1.67
VPS13B-207ENST00000518569 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 ISM1B1AKI9 464 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 FAM20BO75063 409 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 THP07101 528 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 FCER1AP12319 257 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TRIM27P14373 513 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 PHKG2P15735 406 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 FGFR4P22455 802 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 ARFIP2P53365 341 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 SOX8P57073 446 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 MXRA7P84157 204 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 PIGFQ07326 219 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 SEMA5AQ13591 1074 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 HABP2Q14520 560 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-207ENST00000518569 POLD3Q15054 466 aaPredicted RBP4.63□□□□□ -1.67
VPS13B-207ENST00000518569 KIAA0753Q2KHM9 967 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 SWSAP1Q6NVH7 229 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 FOXR2Q6PJQ5 311 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 LRRC55Q6ZSA7 311 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 MAPKAPK5Q8IW41 473 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF276Q8N554 614 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TMIEQ8NEW7 156 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 IL31RAQ8NI17 732 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 LRTOMTQ8WZ04 291 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 LENG9Q96B70 501 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TIFAQ96CG3 184 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 MYEOVQ96EZ4 313 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 MARS2Q96GW9 593 aaKnown RBP4.63□□□□□ -1.67
VPS13B-207ENST00000518569 SUCLG2Q96I99 432 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 PLEKHG4BQ96PX9 1271 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 SLAMF7Q9NQ25 335 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 AKIP1Q9NQ31 210 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TMEM74BQ9NUR3 256 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 DKK2Q9UBU2 259 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 STAP2Q9UGK3 403 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 KCNE5Q9UJ90 142 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 TPCN1Q9ULQ1 816 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 PCDHA6Q9UN73 950 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 FZD1Q9UP38 647 aa4.63□□□□□ -1.67
VPS13B-207ENST00000518569 CFAP69A5D8W1 941 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TMEM200CA6NKL6 621 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF785A8K8V0 405 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 GPANK1O95872 356 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 KRT18P05783 430 aaKnown RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 ELANEP08246 267 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 C1SP09871 688 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 NPR1P16066 1061 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 RPL17P18621 184 aaKnown RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 LAG3P18627 525 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 HDCP19113 662 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 PTGS2P35354 604 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 PSMC1P62191 440 aaKnown RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 FAM189BP81408 668 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 ZXDAP98168 799 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 OCA2Q04671 838 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 EXOSC9Q06265 439 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms