RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 USP19O94966 1318 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 RHPN2P1A8MT19 583 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 PRSS23O95084 383 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 RARBP10826 455 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 MYF5P13349 255 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZKSCAN1P17029 563 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 SCNN1GP51170 649 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 ZNF135P52742 658 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 RABGGTBP53611 331 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 SUMO3P55854 103 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 RHBDL3P58872 404 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 IFIT5Q13325 482 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 HABP2Q14520 560 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 KIF22Q14807 665 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 CSRP2Q16527 193 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 METTL24Q5JXM2 366 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 TSHZ3Q63HK5 1081 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 MAMDC4Q6UXC1 1216 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 Q6ZSN1 163 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 C11orf96Q7Z7L8 435 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 ANKS1AQ92625 1134 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 APIPQ96GX9 242 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 TNIP3Q96KP6 325 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 MRGPRX1Q96LB2 322 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 TBCBQ99426 244 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 SACM1LQ9NTJ5 587 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 RLIMQ9NVW2 624 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 CORO2BQ9UQ03 480 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 CDYLQ9Y232 598 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 USP15Q9Y4E8 981 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-207ENST00000511409 M0QYG6 137 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 LEFTY2O00292 366 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 FRS3O43559 492 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 TBC1D4O60343 1298 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 ANXA1P04083 346 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 CKBP12277 381 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 AK2P54819 239 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 RNASE9P60153 205 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 BIRC2Q13490 618 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 CNGA2Q16280 664 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 NOMO2Q5JPE7 1267 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF783Q6ZMS7 281 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 PDSS2Q86YH6 399 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 SYT12Q8IV01 421 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 PALM2Q8IXS6 379 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 MPP5Q8N3R9 675 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 TMIEQ8NEW7 156 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 OR6B3Q8NGW1 331 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 DVL3Q92997 716 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 NAA15Q9BXJ9 866 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 TRPM5Q9NZQ8 1165 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM30AQ9NZY2 134 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 CPNE7Q9UBL6 633 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 PHTF1Q9UMS5 762 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 SORCS3Q9UPU3 1222 aa4.21□□□□□ -1.74
TRAPPC11-207ENST00000511409 AATKQ6ZMQ8 1374 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 KLRG2A4D1S0 409 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 PRSS29PA6NIE9 313 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 ISM1B1AKI9 464 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 MYO1CO00159 1063 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 BTN3A1O00481 513 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 TBX3O15119 743 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 KPNA5O15131 536 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 VPS4BO75351 444 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 RECQL4O94761 1208 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SCAF4O95104 1147 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 UNC5CO95185 931 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC5A1P13866 664 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF20P17024 532 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SELENOPP49908 381 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 MXRA7P84157 204 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 FMO1Q01740 532 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC13A2Q13183 592 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 RRP1BQ14684 758 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 PRKD1Q15139 912 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 CRB2Q5IJ48 1285 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 EMC10Q5UCC4 262 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 FOXR2Q6PJQ5 311 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 USP37Q86T82 979 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 PDPRQ8NCN5 879 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 CPT1CQ8TCG5 803 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 FBXO41Q8TF61 875 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 NUP133Q8WUM0 1156 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 KBTBD7Q8WVZ9 684 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 EDAQ92838 391 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SCAMP4Q969E2 229 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 MARS2Q96GW9 593 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SUCLG2Q96I99 432 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 C8orf49Q96NF6 230 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 KLHL32Q96NJ5 620 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 RPS6KC1Q96S38 1066 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 DCLRE1CQ96SD1 692 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 PNKPQ96T60 521 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 ELAC2Q9BQ52 826 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms