RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 GPC5P78333 572 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 DR1Q01658 176 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 HIC1Q14526 733 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 DUPD1Q68J44 220 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 LINC01465Q8N7H1 131 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 TXLNGYQ9BZA5 131 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 SEPT11Q9NVA2 429 aaKnown RBP17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 TAS2R14Q9NYV8 317 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 ARHGAP28Q9P2N2 729 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 COG5Q9UP83 839 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 AKT3Q9Y243 479 aa17.16■□□□□ 0.34
SQSTM1-213ENST00000510187 MBLAC1A4D2B0 266 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 MOXD2PA6NHM9 499 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 LRRN2O75325 713 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 CABYRO75952 493 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 ADAM17P78536 824 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 PPP3CAQ08209 521 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 PKN2Q16513 984 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 FAM47CQ5HY64 1035 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 ARHGEF19Q8IW93 802 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 UBLCP1Q8WVY7 318 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 RUNDC3BQ96NL0 473 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 DEFB118Q96PH6 123 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 FMO2Q99518 471 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 ERP44Q9BS26 406 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 TSEN34Q9BSV6 310 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 EXOC7Q9UPT5 735 aa17.15■□□□□ 0.34
SQSTM1-213ENST00000510187 MYO1FO00160 1098 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 ASAP2O43150 1006 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 TREHO43280 583 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 PHF2O75151 1096 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 CYP2C9P11712 490 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 ABCD1P33897 745 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 MXI1P50539 228 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF200P98182 395 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 ENPEPQ07075 957 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 TFDP1Q14186 410 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 TTC31Q49AM3 519 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 TTC19Q6DKK2 380 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 CTTNBP2NLQ9P2B4 639 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 ALG6Q9Y672 507 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 KAT6AQ92794 2004 aa17.14■□□□□ 0.33
SQSTM1-213ENST00000510187 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 VTNP04004 478 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 SCP2P22307 547 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 HOXC8P31273 242 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 CHRNA3P32297 505 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 DLG4P78352 724 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 GUCY1A3Q02108 690 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 DHX9Q08211 1270 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 YTHDF3Q7Z739 585 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 FAM71AQ8IYT1 594 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 RPUSD2Q8IZ73 545 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 KIAA0319LQ8IZA0 1049 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 RDH13Q8NBN7 331 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF668Q96K58 619 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 GLT1D1Q96MS3 346 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 ZSWIM1Q9BR11 485 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 CBWD1Q9BRT8 395 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 FAM129AQ9BZQ8 928 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 FAM49AQ9H0Q0 323 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 WNT8AQ9H1J5 351 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 SMIM35A0A1B0GVV1 85 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 KBTBD13C9JR72 458 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 FAM107AO95990 144 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PAEPP09466 180 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 GCLMP48507 274 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 NAA35Q5VZE5 725 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 HOOK3Q86VS8 718 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 NLRP14Q86W24 1093 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 MAP4K3Q8IVH8 894 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 ZNF473Q8WTR7 871 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 ALG3Q92685 438 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PCIF1Q9H4Z3 704 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 ZDHHC18Q9NUE0 388 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 PCYOX1Q9UHG3 505 aa17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 NOCTQ9UK39 431 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-213ENST00000510187 K7ERI5 159 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 NUDT17P0C025 328 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 FLT3P36888 993 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 EFNA5P52803 228 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 MFAP3P55082 362 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 PPP2R2AP63151 447 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 STRN3Q13033 797 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SQSTM1-213ENST00000510187 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms