RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 LIFRP42702 1097 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 GPR3P46089 330 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ARL4CP56559 192 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 HSD17B7P56937 341 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 SCAND1P57086 179 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 SESN3P58005 492 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 INHBEP58166 350 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 GPR85P60893 370 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 DBPQ10586 325 aaPredicted RBP4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 PSMD6Q15008 389 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ACAP2Q15057 778 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 GGT6Q6P531 493 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 MAMDC4Q6UXC1 1216 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 GALNT13Q8IUC8 556 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 CEP57L1Q8IYX8 460 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 SAMD14Q8IZD0 417 aaPredicted RBP4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ANKRD52Q8NB46 1076 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 LILRB1Q8NHL6 650 aaPredicted RBP4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ZSCAN31Q96LW9 406 aaPredicted RBP4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 KATNAL1Q9BW62 490 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 PLA2G12BQ9BX93 195 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 RIC8BQ9NVN3 520 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ARGLU1Q9NWB6 273 aaPredicted RBP4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 DCAF16Q9NXF7 216 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 TRAF6Q9Y4K3 522 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 PCDHGB2Q9Y5G2 931 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 PCDHA9Q9Y5H5 950 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 ASXL2Q76L83 1435 aa4.87□□□□□ -1.63
SMARCA5-202ENST00000508573 A0A087X1B8 175 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 FAM227AF5H4B4 570 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 UBXN7O94888 489 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 BAG2O95816 211 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ATP2A2P16615 1042 aaKnown RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 NAT1P18440 290 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 TGM1P22735 817 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 PDIA3P30101 505 aaKnown RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 HPDP32754 393 aaPredicted RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 KCNQ1P51787 676 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 NR1H2P55055 460 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 UBASH3AP57075 661 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 GALNT1Q10472 559 aaPredicted RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 PPP2R5BQ15173 497 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 CLUL1Q15846 466 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 TBR1Q16650 682 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 CFAP58Q5T655 872 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 DSTYKQ6XUX3 929 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 MFSD6Q6ZSS7 791 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 CATSPER4Q7RTX7 472 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 DAAM2Q86T65 1068 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ARHGEF25Q86VW2 580 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ERC1Q8IUD2 1116 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 CACNA2D3Q8IZS8 1091 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ZNF808Q8N4W9 903 aaPredicted RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 NAT8LQ8N9F0 302 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 MSANTD4Q8NCY6 345 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 SIMC1Q8NDZ2 872 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 MGARPQ8TDB4 240 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 SH3RF2Q8TEC5 729 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 UCMAQ8WVF2 138 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 TRAPPC12Q8WVT3 735 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 N4BP2L2Q92802 583 aaPredicted RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 SLC5A5Q92911 643 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 MPHOSPH8Q99549 860 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ZFYVE21Q9BQ24 234 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 TREX2Q9BQ50 279 aaPredicted RBP4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 B3GNT5Q9BYG0 378 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 NUP62CLQ9H1M0 184 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 ABCF3Q9NUQ8 709 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 NSMCE4AQ9NXX6 385 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 DACT1Q9NYF0 836 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 EPS15L1Q9UBC2 864 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 AASSQ9UDR5 926 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
SMARCA5-202ENST00000508573 A0A087X0M5 115 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 A0A1B0GX30 115 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 A0A1W2PPH5 198 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 TCRBV5S4A2TA0A5A2 114 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 H3BML4 177 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 H7C0S8 307 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 MATN2O00339 956 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ADAMTS3O15072 1205 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 B3GALT2O43825 422 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 DOK2O60496 412 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 USO1O60763 962 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 GAS7O60861 476 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 RPS19P39019 145 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 ADCY8P40145 1251 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 TECP42680 631 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 PAPOLAP51003 745 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 MAPK10P53779 464 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 CLNS1AP54105 237 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 TMF1P82094 1093 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 FOXL1Q12952 345 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 SPARCL1Q14515 664 aa4.85□□□□□ -1.63
SMARCA5-202ENST00000508573 PARP10Q53GL7 1025 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms