RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 VSX1Q9NZR4 365 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-204ENST00000505804 USP25Q9UHP3 1055 aa5.09□□□□□ -1.59
TOPBP1-204ENST00000505804 ZDHHC8Q9ULC8 765 aa5.09□□□□□ -1.59
TOPBP1-204ENST00000505804 MAP3K2Q9Y2U5 619 aa5.09□□□□□ -1.59
TOPBP1-204ENST00000505804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.09□□□□□ -1.59
TOPBP1-204ENST00000505804 USP19O94966 1318 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 A0A1B0GTW7 788 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 PHGDHO43175 533 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 NCR1O76036 304 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 ANXA1P04083 346 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 HRGP04196 525 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 ELANEP08246 267 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 ADRB1P08588 477 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 RARBP10826 455 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 KCNJ5P48544 419 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 SOX8P57073 446 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 DARS2Q6PI48 645 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 USP37Q86T82 979 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 MAPKAPK5Q8IW41 473 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 CCAR1Q8IX12 1150 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 FAM43AQ8N2R8 423 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 PDPRQ8NCN5 879 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 SCAMP4Q969E2 229 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 MRGPRX1Q96LB2 322 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 PNKPQ96T60 521 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 C22orf23Q9BZE7 217 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 RNPEPQ9H4A4 650 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 CNNM1Q9NRU3 951 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 HSFX1Q9UBD0 423 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 AGAP1Q9UPQ3 857 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 FAM50BQ9Y247 325 aa5.08□□□□□ -1.6
TOPBP1-204ENST00000505804 NCANO14594 1321 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 C1QTNF3-AMACRE9PGA6 284 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 E9PLN8 166 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 RNASET2O00584 256 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 CAND2O75155 1236 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 NDUFA10O95299 355 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 GPANK1O95872 356 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 KRT18P05783 430 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 SPATA31D3P0C874 917 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 NPR1P16066 1061 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 FGFR4P22455 802 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 NR4A1P22736 598 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 BUD31P41223 144 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF135P52742 658 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 CACNB3P54284 484 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 HSD11B2P80365 405 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 OCA2Q04671 838 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 FOXE3Q13461 319 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 HABP2Q14520 560 aaPredicted RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 COBLL1Q53SF7 1204 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 CRB2Q5IJ48 1285 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 EMC10Q5UCC4 262 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 APOA5Q6Q788 366 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 LRRC55Q6ZSA7 311 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 SPATA31D4Q6ZUB0 917 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 CFAP52Q8N1V2 620 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 TMEM132CQ8N3T6 1108 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF276Q8N554 614 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 IL31RAQ8NI17 732 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 TTC17Q96AE7 1141 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 P2RX7Q99572 595 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 VKORC1Q9BQB6 163 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 SARGQ9BW04 601 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 SLC46A2Q9BY10 475 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 GPR35Q9HC97 309 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 AKIP1Q9NQ31 210 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 DDX21Q9NR30 783 aaKnown RBP eCLIP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 MRPS18AQ9NVS2 196 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 RLIMQ9NVW2 624 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 PIH1D1Q9NWS0 290 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 PCDHGB6Q9Y5F9 930 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 FPGT-TNNI3KV9GXZ4 949 aa5.07□□□□□ -1.6
TOPBP1-204ENST00000505804 GOLIM4O00461 696 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 GNAI2P04899 355 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 INSRRP14616 1297 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 ZFP36P26651 326 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 SLC7A1P30825 629 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 FAM193AP78312 1265 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF844Q08AG5 666 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 HLTFQ14527 1009 aaKnown RBP eCLIP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 B3GNTL1Q67FW5 361 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 FOXR2Q6PJQ5 311 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 SLC30A10Q6XR72 485 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 SLC25A43Q8WUT9 341 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 LRTOMTQ8WZ04 291 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 ANKS1AQ92625 1134 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF503Q96F45 646 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 LRIG1Q96JA1 1093 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 APOL5Q9BWW9 433 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 SLC2A4RGQ9NR83 387 aa5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 MTO1Q9Y2Z2 717 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-204ENST00000505804 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms