RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 ZNF135P52742 658 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 RHBDL3P58872 404 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 PLP2Q04941 152 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 HDAC1Q13547 482 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 CRB2Q5IJ48 1285 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 C11orf96Q7Z7L8 435 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 VKORC1Q9BQB6 163 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 TLR10Q9BXR5 811 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 TINAGL1Q9GZM7 467 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 KLC2Q9H0B6 622 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 NUP62CLQ9H1M0 184 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 DEF6Q9H4E7 631 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 STK32BQ9NY57 414 aa6.88□□□□□ -1.31
TRAPPC13-206ENST00000504751 XDHP47989 1333 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 TRIM24O15164 1050 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 DNAJB5O75953 348 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 TM4SF4P48230 202 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 CRHR2Q13324 411 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 ERICH6BQ5W0A0 696 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 PDPRQ8NCN5 879 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 OR56A1Q8NGH5 318 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 KLHL11Q9NVR0 708 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 SMPD4Q9NXE4 827 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 PHTF1Q9UMS5 762 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 AGAP1Q9UPQ3 857 aa6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAPPC13-206ENST00000504751 CCDC78A2IDD5 438 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 ZNF185O15231 689 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 FOXD2O60548 495 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 ABHD16AO95870 558 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 GNAI2P04899 355 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 MYL3P08590 195 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 CKBP12277 381 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 PIK3CBP42338 1070 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 RNASE9P60153 205 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 FMO1Q01740 532 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 TCF15Q12870 199 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 HABP2Q14520 560 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 PRKD1Q15139 912 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 CNGA2Q16280 664 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 PCSK9Q8NBP7 692 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 MAML1Q92585 1016 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 PHKBQ93100 1093 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 IMPG2Q9BZV3 1241 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 SRRDQ9UH36 339 aa6.86□□□□□ -1.31
TRAPPC13-206ENST00000504751 AHRRA9YTQ3 701 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 CHEK2O96017 543 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 PIM1P11309 404 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 BRAFP15056 766 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 RPL17P18621 184 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 KCNJ5P48544 419 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 SUMO3P55854 103 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 CDSNQ15517 529 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 LONRF1Q17RB8 773 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 PDCD4Q53EL6 469 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 PPP1R32Q7Z5V6 425 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 SLC17A8Q8NDX2 589 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 CHST13Q8NET6 341 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 PARD3BQ8TEW8 1205 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 DDX17Q92841 729 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 MARS2Q96GW9 593 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 SUCLG2Q96I99 432 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 DCLRE1CQ96SD1 692 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 TEX101Q9BY14 249 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 SMURF2Q9HAU4 748 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 KIAA1586Q9HCI6 787 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 MRPS18AQ9NVS2 196 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 VSX1Q9NZR4 365 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 HSFX1Q9UBD0 423 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 CORO2BQ9UQ03 480 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 CDYLQ9Y232 598 aa6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 USP15Q9Y4E8 981 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-206ENST00000504751 DIRC3C9JPN6 131 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 MUSKO15146 869 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 UNC5CO95185 931 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 PRIM2P49643 509 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 ALDH5A1P51649 535 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 CASP5P51878 434 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 OCA2Q04671 838 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 EFEMP1Q12805 493 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 TSHZ3Q63HK5 1081 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 ZNF783Q6ZMS7 281 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 GDF7Q7Z4P5 450 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 SESTD1Q86VW0 696 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 OR6B3Q8NGW1 331 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 MSLNLQ96KJ4 702 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 REXO4Q9GZR2 422 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 RNPEPQ9H4A4 650 aa6.84□□□□□ -1.31
TRAPPC13-206ENST00000504751 ZNF287Q9HBT7 754 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms