RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 COILP38432 576 aaPredicted RBP23.95■■□□□ 1.42
PCDH1-204ENST00000503492 DRG2P55039 364 aaKnown RBP23.95■■□□□ 1.42
PCDH1-204ENST00000503492 DAB2IPQ5VWQ8 1189 aa23.95■■□□□ 1.42
PCDH1-204ENST00000503492 KCTD16Q68DU8 428 aa23.95■■□□□ 1.42
PCDH1-204ENST00000503492 LRIG3Q6UXM1 1119 aa23.95■■□□□ 1.42
PCDH1-204ENST00000503492 XYLT2Q9H1B5 865 aa23.95■■□□□ 1.42
PCDH1-204ENST00000503492 IQCA1LA6NCM1 817 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 FSCN2O14926 492 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CETPP11597 493 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 ADCYAP1R1P41586 468 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 C1QBPQ07021 282 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 MAP1SQ66K74 1059 aaPredicted RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 AFG1LQ8WV93 481 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 FMO2Q99518 471 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 NFKBIZQ9BYH8 718 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 KATNBL1Q9H079 304 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CLEC11AQ9Y240 323 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CCL15-CCL14A0A0B4J2E2 113 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 RBM47A0AV96 593 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 GPR25O00155 361 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CSDE1O75534 798 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 HNRNPH2P55795 449 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 DHX9Q08211 1270 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CCL15Q16663 113 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 ZNF699Q32M78 642 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 ZNF394Q53GI3 561 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CEP85LQ5SZL2 805 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 LINC01465Q8N7H1 131 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 OR2W6PQ8NHA6 318 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 PPTC7Q8NI37 304 aa23.94■■□□□ 1.42
PCDH1-204ENST00000503492 UBLCP1Q8WVY7 318 aaPredicted RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 DDX27Q96GQ7 796 aaKnown RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.94■■□□□ 1.42
PCDH1-204ENST00000503492 WEE2P0C1S8 567 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 ZNF286BP0CG31 522 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 CXCL8P10145 99 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 BRD2P25440 801 aaKnown RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 ZSCAN26Q16670 478 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 ZDHHC24Q6UX98 284 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 PNMA8AQ86V59 439 aaPredicted RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 C12orf50Q8NA57 414 aaPredicted RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 BRI3BPQ8WY22 251 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 ANKRD36BP1Q96IX9 119 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 PPP1R16BQ96T49 567 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 PLVAPQ9BX97 442 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 MRPL47Q9HD33 250 aaKnown RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 GRHL1Q9NZI5 618 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 SLC45A1Q9Y2W3 748 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 A0A087WZ62 844 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 GJB6O95452 261 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 TNNC2P02585 160 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 ASPAP45381 313 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 PHKA2P46019 1235 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 KCNJ1P48048 391 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 MTMR3Q13615 1198 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 SCARA5Q6ZMJ2 495 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 LEKR1Q6ZMV7 388 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 FDXACB1Q9BRP7 624 aaPredicted RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 TXLNGYQ9BZA5 131 aa23.93■■□□□ 1.42
PCDH1-204ENST00000503492 PRMT7Q9NVM4 692 aaPredicted RBP23.93■■□□□ 1.42
PCDH1-204ENST00000503492 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 O00370 1275 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 PODXLO00592 558 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 SHOX2O60902 331 aaPredicted RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 SNAI1O95863 264 aaPredicted RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 MMP8P22894 467 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 POU5F1BQ06416 359 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 PPP1R2P3Q6NXS1 205 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 CCDC105Q8IYK2 499 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 C1orf131Q8NDD1 294 aaKnown RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 HERPUD2Q9BSE4 406 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 LRRC19Q9H756 370 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 RPF1Q9H9Y2 349 aaKnown RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 RPS6KA5O75582 802 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 RPL21P46778 160 aaKnown RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 GTF2A2P52657 109 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 PLTPP55058 493 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 AMHR2Q16671 573 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 DNAJC21Q5F1R6 531 aaKnown RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 EMID1Q96A84 441 aaPredicted RBP23.92■■□□□ 1.42
PCDH1-204ENST00000503492 C16orf70Q9BSU1 422 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 MORF4L1Q9UBU8 362 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 SCINQ9Y6U3 715 aa23.92■■□□□ 1.42
PCDH1-204ENST00000503492 UNCXA6NJT0 531 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 MAGEB2O15479 319 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 MEFVO15553 781 aaPredicted RBP23.91■■□□□ 1.42
PCDH1-204ENST00000503492 PPFIA2O75334 1257 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 FNTAP49354 379 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 TAS2R40P59535 323 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 FAM187BQ17R55 369 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 LRRC31Q6UY01 552 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 TMEM130Q8N3G9 435 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 FBXO25Q8TCJ0 367 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 TMBIM4Q9HC24 238 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.91■■□□□ 1.42
PCDH1-204ENST00000503492 ZSWIM8A7E2V4 1837 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 TLR3O15455 904 aaKnown RBP23.91■■□□□ 1.42
PCDH1-204ENST00000503492 STRNO43815 780 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 ZNF844Q08AG5 666 aa23.91■■□□□ 1.42
PCDH1-204ENST00000503492 FEZF2Q8TBJ5 459 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms