RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 MRPL49Q13405 166 aaKnown RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 PFKFB4Q16877 469 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 FAM26FQ5R3K3 315 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 UNC13DQ70J99 1090 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 RNF44Q7L0R7 432 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 ADGRE4PQ86SQ3 457 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 MUL1Q969V5 352 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 TBC1D20Q96BZ9 403 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 GCC1Q96CN9 775 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 RMDN3Q96TC7 470 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 HEPHQ9BQS7 1158 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 A1CFQ9NQ94 594 aaKnown RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 TM7SF3Q9NS93 570 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 SAGE1Q9NXZ1 904 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 PLEKHM1Q9Y4G2 1056 aa6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P3-201ENST00000502802 UNC5CO95185 931 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 AMHP03971 560 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ANXA1P04083 346 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 KLRC1P26715 233 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC6A4P31645 630 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 CARSP49589 748 aaKnown RBP6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 POU6F2P78424 691 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 GALNT1Q10472 559 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF568Q3ZCX4 644 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF529Q6P280 563 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 MMS22LQ6ZRQ5 1243 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF365Q70YC5 407 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 CACNA2D3Q8IZS8 1091 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 CYP2W1Q8TAV3 490 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 TRAPPC12Q8WVT3 735 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 IPCEF1Q8WWN9 437 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 DDX17Q92841 729 aaKnown RBP6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 C18orf8Q96DM3 657 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 PAGR1Q9BTK6 254 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 CHST8Q9H2A9 424 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 GPR35Q9HC97 309 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 IL23AQ9NPF7 189 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 PGAP2Q9UHJ9 254 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 ITGB1BP2Q9UKP3 347 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 NR2E1Q9Y466 385 aa6.3□□□□□ -1.4
HMGB1P3-201ENST00000502802 A0A087WWL8 130 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 ETV2O00321 342 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 NPC1O15118 1278 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC26A4O43511 780 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 DNAJB5O75953 348 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 HAUS5O94927 633 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 MYL4P12829 197 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 ALAS1P13196 640 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC11A2P49281 568 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 CLRN1P58418 232 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 PSMC1P62191 440 aaKnown RBP6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 DUSP8Q13202 625 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 SSPNQ14714 243 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 FBXO38Q6PIJ6 1188 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 ANKRD18AQ8IVF6 992 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 CARFQ8N187 725 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC15A4Q8N697 577 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 TEX19Q8NA77 164 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 ADAMTS17Q8TE56 1095 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 GDF15Q99988 308 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 TMEM120AQ9BXJ8 343 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 STK31Q9BXU1 1019 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 MAGEH1Q9H213 219 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 OBP2BQ9NPH6 170 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 DACT1Q9NYF0 836 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 GRHPRQ9UBQ7 328 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF212Q9UDV6 495 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 SLC45A2Q9UMX9 530 aa6.29□□□□□ -1.4
HMGB1P3-201ENST00000502802 PNPLA7Q6ZV29 1317 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 UBE2QL1A1L167 161 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 ZNF785A8K8V0 405 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 LGALS16A8MUM7 142 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 TMEM233B4DJY2 109 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 B5MCH6 92 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 M0R3H8 397 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 MYO1CO00159 1063 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 POMCP01189 267 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 GRPP07492 148 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 DHRS4L1P0CG22 281 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 TXNP10599 105 aaKnown RBP6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 IL1R1P14778 569 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 PI3P19957 117 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 GLDCP23378 1020 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 MAPK9P45984 424 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 UCP3P55916 312 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 FOXO1Q12778 655 aa6.28□□□□□ -1.4
HMGB1P3-201ENST00000502802 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms