RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PRR18Q8N4B5 295 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 FAM98AQ8NCA5 519 aaKnown RBP4.92□□□□□ -1.62
CD46-218ENST00000496723 CAGE1Q8TC20 777 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 GTPBP4Q9BZE4 634 aaKnown RBP4.92□□□□□ -1.62
CD46-218ENST00000496723 RNPEPQ9H4A4 650 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 RSAD1Q9HA92 442 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 MAN1C1Q9NR34 630 aa4.92□□□□□ -1.62
CD46-218ENST00000496723 E2F8A0AVK6 867 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 CCDC78A2IDD5 438 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 UNC119BA6NIH7 251 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 AKAP10O43572 662 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 MALP21145 153 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 FGFR4P22455 802 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 AKAP5P24588 427 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 FXR1P51114 621 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD46-218ENST00000496723 HSD11B2P80365 405 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 OCA2Q04671 838 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 MPP3Q13368 585 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 SNAPC2Q13487 334 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 SPDYE7PQ495Y7 208 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 ODR4Q5SWX8 454 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 UTP14CQ5TAP6 766 aaKnown RBP4.91□□□□□ -1.62
CD46-218ENST00000496723 TMEM132CQ8N3T6 1108 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 BOLLQ8N9W6 283 aaKnown RBP4.91□□□□□ -1.62
CD46-218ENST00000496723 C3orf20Q8ND61 904 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 IL17RDQ8NFM7 739 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 MARS2Q96GW9 593 aaKnown RBP4.91□□□□□ -1.62
CD46-218ENST00000496723 NUP88Q99567 741 aaPredicted RBP4.91□□□□□ -1.62
CD46-218ENST00000496723 ADAM2Q99965 735 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 LRFN3Q9BTN0 628 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 SPATA5L1Q9BVQ7 753 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 PACSIN1Q9BY11 444 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 RHOBTB2Q9BYZ6 727 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 RNF181Q9P0P0 153 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 USP25Q9UHP3 1055 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 ZNF180Q9UJW8 692 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 POLHQ9Y253 713 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 MAST3O60307 1309 aa4.91□□□□□ -1.62
CD46-218ENST00000496723 F2RL2O00254 374 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 AGFG2O95081 481 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 SPDEFO95238 335 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 GPANK1O95872 356 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 SMARCA1P28370 1054 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 MPLP40238 635 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 EPHB1P54762 984 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 TP53BP2Q13625 1128 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 PGS1Q32NB8 556 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 PLEKHG6Q3KR16 790 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 THEMIS2Q5TEJ8 643 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 B3GNTL1Q67FW5 361 aaPredicted RBP4.9□□□□□ -1.63
CD46-218ENST00000496723 FOXR2Q6PJQ5 311 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 JPH3Q8WXH2 748 aaPredicted RBP4.9□□□□□ -1.63
CD46-218ENST00000496723 RGMAQ96B86 450 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 RNF31Q96EP0 1072 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 PNKPQ96T60 521 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 ALG13Q9NP73 1137 aaKnown RBP4.9□□□□□ -1.63
CD46-218ENST00000496723 JKAMPQ9P055 326 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 TLK1Q9UKI8 766 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 MTO1Q9Y2Z2 717 aaKnown RBP4.9□□□□□ -1.63
CD46-218ENST00000496723 PCDHA3Q9Y5H8 950 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 NOX1Q9Y5S8 564 aa4.9□□□□□ -1.63
CD46-218ENST00000496723 SLC16A6O15403 523 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 SLC43A1O75387 559 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 CDKL5O76039 1030 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 FOSP01100 380 aaPredicted RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 FTLP02792 175 aaPredicted RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 FCER1AP12319 257 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 NHLH1Q02575 133 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 SLFN5Q08AF3 891 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 NOGQ13253 232 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 PAPD7Q5XG87 772 aaKnown RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 SLC4A10Q6U841 1118 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 ANKRD13AQ8IZ07 590 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 ASB10Q8WXI3 467 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 MVB12AQ96EY5 273 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 RTFDC1Q9BY42 306 aaPredicted RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 ALOXE3Q9BYJ1 711 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 HSFX1Q9UBD0 423 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 SLC45A2Q9UMX9 530 aa4.89□□□□□ -1.63
CD46-218ENST00000496723 THRAP3Q9Y2W1 955 aaKnown RBP4.89□□□□□ -1.63
CD46-218ENST00000496723 POLR2AP24928 1970 aaKnown RBP4.88□□□□□ -1.63
CD46-218ENST00000496723 NT5C1B-RDH14C9J2C7 533 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 OFD1O75665 1012 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 ARIH2O95376 493 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 S100BP04271 92 aaPredicted RBP4.88□□□□□ -1.63
CD46-218ENST00000496723 FDXRP22570 491 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 MAP2K6P52564 334 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 HK3P52790 923 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 CXADRP78310 365 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 CCDC93Q567U6 631 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 CCDC157Q569K6 752 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 IFIT1BQ5T764 474 aaKnown RBP4.88□□□□□ -1.63
CD46-218ENST00000496723 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.88□□□□□ -1.63
CD46-218ENST00000496723 ZNF365Q70YC5 407 aa4.88□□□□□ -1.63
CD46-218ENST00000496723 HEATR3Q7Z4Q2 680 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms