RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 INSL5Q9Y5Q6 135 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 STYXL1Q9Y6J8 313 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 NUMBLQ9Y6R0 609 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 N4BP1O75113 896 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 MICAL2O94851 1124 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 FGF19O95750 216 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 F13A1P00488 732 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 ADRB2P07550 413 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 RHOP08100 348 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 AOC1P19801 751 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 GARTP22102 1010 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 TAF6P49848 677 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 VCPP55072 806 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 SMARCB1Q12824 385 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 HTR4Q13639 388 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 MYBPC2Q14324 1141 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 TAF12Q16514 161 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 RSPO2Q6UXX9 243 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 NOC3LQ8WTT2 800 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 RSAD2Q8WXG1 361 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 AVENQ9NQS1 362 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 ASAH2Q9NR71 780 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 SLC2A4RGQ9NR83 387 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 DPP3Q9NY33 737 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 TBC1D7Q9P0N9 293 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 DNMT3BQ9UBC3 853 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 ATP6V1DQ9Y5K8 247 aa17.93■□□□□ 0.46
PDLIM2-217ENST00000491330 ANKRD63C9JTQ0 380 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 PDGFBP01127 241 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 ME1P48163 572 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 LILRA4P59901 499 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 NTHL1P78549 312 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 VEPH1Q14D04 833 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 SURF1Q15526 300 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 SV2CQ496J9 727 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 IER5LQ5T953 404 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 C9orf57Q5W0N0 161 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 SENP8Q96LD8 212 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 HAPLN2Q9GZV7 340 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 KIAA1586Q9HCI6 787 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 CA14Q9ULX7 337 aa17.92■□□□□ 0.46
PDLIM2-217ENST00000491330 CITO14578 2027 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 TBC1D4O60343 1298 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 TUFMP49411 452 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 MRE11P49959 708 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 GPR17Q13304 367 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 PRSS33Q8NF86 280 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 ITFG1Q8TB96 612 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 MCRS1Q96EZ8 462 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 FIZ1Q96SL8 496 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 FAM213AQ9BRX8 229 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 SMOC2Q9H3U7 446 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 ARHGEF3Q9NR81 526 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 RBAKQ9NYW8 714 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 TIMM13Q9Y5L4 95 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 TECTAO75443 2155 aa17.91■□□□□ 0.46
PDLIM2-217ENST00000491330 NCAM2O15394 837 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 NARSO43776 548 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 FAM189A1O60320 539 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 ECI2O75521 394 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 AARSP49588 968 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 ASIC1P78348 528 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 TFAMQ00059 246 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 PRKCQQ04759 706 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 TWF1Q12792 350 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 ZBTB41Q5SVQ8 909 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 FOXD4L5Q5VV16 416 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 PHLDB3Q6NSJ2 640 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 PARM1Q6UWI2 310 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 NPAS3Q8IXF0 933 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 CEP57L1Q8IYX8 460 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 DCP1BQ8IZD4 617 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 FEZF2Q8TBJ5 459 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 FAM200AQ8TCP9 573 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 GPR152Q8TDT2 470 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 LRRC15Q8TF66 581 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 C2orf15Q8WU43 125 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 FOXD4L4Q8WXT5 416 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 E2F7Q96AV8 911 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 DHX58Q96C10 678 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 DNAJC19Q96DA6 116 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 GCNAQ96QF7 691 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 SLITRK6Q9H5Y7 841 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 ZFP14Q9HCL3 533 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 HCFC1R1Q9NWW0 138 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 HSFX1Q9UBD0 423 aa17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 MRPS17Q9Y2R5 130 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-217ENST00000491330 PIRO00625 290 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 CYB561D2O14569 222 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 EXTL3O43909 919 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 NFICP08651 508 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 TMEM191BP0C7N4 346 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 MYL4P12829 197 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 IGFBP6P24592 240 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 ARHGAP15Q53QZ3 475 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 SLC39A4Q6P5W5 647 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms