RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 KRT37O76014 449 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 PGK2P07205 417 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 MYL3P08590 195 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 GARSP41250 739 aaKnown RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ITGA8P53708 1063 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ROR1Q01973 937 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 CNTN2Q02246 1040 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 OR6J1Q8NGC5 347 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-214ENST00000487615 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
TRA2B-214ENST00000487615 ASTN2O75129 1339 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ZBTB22O15209 634 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 CHN1P15882 459 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 PDGFRAP16234 1089 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 SLC12A2P55011 1212 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 KYNUQ16719 465 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 FAM47EQ6ZV65 393 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 MEFVO15553 781 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 FAM153BP0C7A2 387 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ALDH5A1P51649 535 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 CLCN3P51790 818 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 SEC24CP53992 1094 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 RNASELQ05823 741 aaKnown RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 FAM153CQ494X1 144 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 MPZL3Q6UWV2 235 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 INPP4AQ96PE3 977 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 FAM153AQ9UHL3 310 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 PROSCO94903 275 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ADRB2P07550 413 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ARL1P40616 181 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 SLC26A2P50443 739 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 PSMD6Q15008 389 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 NFIL3Q16649 462 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 XPO6Q96QU8 1125 aaKnown RBP12.47□□□□□ -0.41
TRA2B-214ENST00000487615 FZD1Q9UP38 647 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 MYBL2P10244 700 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 LRRC31Q6UY01 552 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 TMBIM4Q9HC24 238 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 TAS2R14Q9NYV8 317 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
TRA2B-214ENST00000487615 NLRP11P59045 1033 aaKnown RBP12.46□□□□□ -0.41
TRA2B-214ENST00000487615 PTGISQ16647 500 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 LENG9Q96B70 501 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 NACA2Q9H009 215 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 MROH8Q9H579 483 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 FAM107AO95990 144 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 CDC42EP1Q00587 391 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 DGKZQ13574 1117 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 CATSPERGQ6ZRH7 1159 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 FBXO16Q8IX29 292 aaPredicted RBP12.46□□□□□ -0.41
TRA2B-214ENST00000487615 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
TRA2B-214ENST00000487615 TBC1D31Q96DN5 1066 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.41
TRA2B-214ENST00000487615 NT5C1AQ9BXI3 368 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 SENP1Q9P0U3 644 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 TPX2Q9ULW0 747 aaKnown RBP12.46□□□□□ -0.41
TRA2B-214ENST00000487615 USP20Q9Y2K6 914 aa12.46□□□□□ -0.41
TRA2B-214ENST00000487615 A0A1B0GUA9 196 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 ITGB3P05106 788 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 RARGP13631 454 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 ADORA2BP29275 332 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 CA8P35219 290 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 PRPSAP1Q14558 356 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 CYP4A22Q5TCH4 519 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 TSEN2Q8NCE0 465 aaKnown RBP12.46□□□□□ -0.42
TRA2B-214ENST00000487615 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.42
TRA2B-214ENST00000487615 ADCY3O60266 1144 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 TNFRSF8P28908 595 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 MYL6P60660 151 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 UGCGQ16739 394 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ARL13BQ3SXY8 428 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ZPBP2Q6X784 338 aa12.45□□□□□ -0.42
TRA2B-214ENST00000487615 ELMO3Q96BJ8 720 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms