RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 AFF4Q9UHB7 1163 aaKnown RBP6.07□□□□□ -1.44
PRPF38A-203ENST00000487160 CDHR4A6H8M9 788 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 NPEPPSL1A6NEC2 478 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 MFAP3LO75121 409 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 ABHD16AO95870 558 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 TSHRP16473 764 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 MSX2P35548 267 aaPredicted RBP6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 FOXL1Q12952 345 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 STK3Q13188 491 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 DAG1Q14118 895 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 HABP2Q14520 560 aaPredicted RBP6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 ELAVL1Q15717 326 aaKnown RBP6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 FAM83BQ5T0W9 1011 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 TCTN3Q6NUS6 607 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 TSHZ1Q6ZSZ6 1077 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 PDSS2Q86YH6 399 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 CCDC33Q8N5R6 958 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 FITM2Q8N6M3 262 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 AOPEPQ8N6M6 819 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 ZSCAN18Q8TBC5 510 aaPredicted RBP6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 TBC1D15Q8TC07 691 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 ST8SIA2Q92186 375 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 NMD3Q96D46 503 aaKnown RBP6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 DPH1Q9BZG8 443 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 CERS4Q9HA82 394 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 SMURF2Q9HAU4 748 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 POGKQ9P215 609 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 MRC2Q9UBG0 1479 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 PDS5BQ9NTI5 1447 aa6.06□□□□□ -1.44
PRPF38A-203ENST00000487160 DRGXA6NNA5 263 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 ZNF785A8K8V0 405 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 DNAJB5O75953 348 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 GNAI2P04899 355 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 ITGB1P05556 798 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 HK1P19367 917 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 ZNF135P52742 658 aaPredicted RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 RPS16P62249 146 aaKnown RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 BTKQ06187 659 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 SLC13A2Q13183 592 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 CTBP1Q13363 440 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 DHX8Q14562 1220 aaKnown RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 GRAMD1BQ3KR37 738 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 CRB2Q5IJ48 1285 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 KLHDC7AQ5VTJ3 777 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 IZUMO3Q5VZ72 239 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 MED25Q71SY5 747 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 USP37Q86T82 979 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 FUKQ8N0W3 1084 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 MB21D1Q8N884 522 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 RNF152Q8N8N0 203 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 SLC17A8Q8NDX2 589 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 TMIEQ8NEW7 156 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 MDGA1Q8NFP4 955 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 OR52N2Q8NGI0 321 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 KIAA1191Q96A73 305 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 MSLNLQ96KJ4 702 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 PHACTR3Q96KR7 559 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 MPHOSPH9Q99550 1183 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 VPS11Q9H270 941 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 GPR35Q9HC97 309 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 TRMT13Q9NUP7 481 aaKnown RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 GPRC5BQ9NZH0 403 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 PADI4Q9UM07 663 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 AGAP1Q9UPQ3 857 aa6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 ZFR2Q9UPR6 939 aaKnown RBP6.05□□□□□ -1.44
PRPF38A-203ENST00000487160 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 DBX1A6NMT0 343 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 F5H423 210 aaPredicted RBP6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 RAD17O75943 681 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 IPO13O94829 963 aaKnown RBP6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 PRSS23O95084 383 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 UNC5CO95185 931 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 ANXA1P04083 346 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 THP07101 528 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 ABCB4P21439 1286 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 TRAPPC10P48553 1259 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 TBC1D10BQ4KMP7 808 aaPredicted RBP6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 HIBCHQ6NVY1 386 aaPredicted RBP6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 OR10H5Q8NGA6 315 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 SCAMP4Q969E2 229 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 KLHL32Q96NJ5 620 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 KCNC2Q96PR1 638 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 PPCSQ9HAB8 311 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 ARFGAP3Q9NP61 516 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 CDC23Q9UJX2 597 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 CLCA2Q9UQC9 943 aa6.04□□□□□ -1.44
PRPF38A-203ENST00000487160 OTOL1A6NHN0 477 aaPredicted RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 TMEM233B4DJY2 109 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 APOL1O14791 398 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 FOXS1O43638 330 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 ZSCAN22P10073 491 aaPredicted RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 TXKP42681 527 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 CHN2P52757 468 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 UCP3P55916 312 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 HTRA4P83105 476 aaPredicted RBP6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 DGKKQ5KSL6 1271 aa6.03□□□□□ -1.44
PRPF38A-203ENST00000487160 ERAP2Q6P179 960 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms