RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 TTLL13PA6NNM8 815 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 CCDC169A6NNP5 214 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 POU2F2P09086 479 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 TGM1P22735 817 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 IGFBP6P24592 240 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 NAMPTP43490 491 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 PRPF4BQ13523 1007 aaKnown RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 CAMK4Q16566 473 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 FAM187BQ17R55 369 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 CDCA2Q69YH5 1023 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 APBB1IPQ7Z5R6 666 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 PLA2G2FQ9BZM2 168 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 ZSCAN32Q9NX65 697 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 TBC1D7Q9P0N9 293 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 SMG5Q9UPR3 1016 aaKnown RBP19.19■□□□□ 0.66
MCF2L-226ENST00000486210 TRIP11Q15643 1979 aa19.19■□□□□ 0.66
MCF2L-226ENST00000486210 COL4A2P08572 1712 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 SLC16A4O15374 487 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 XYLBO75191 536 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 PRKCBP05771 671 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 NMT1P30419 496 aaKnown RBP19.18■□□□□ 0.66
MCF2L-226ENST00000486210 MAGEA9P43362 315 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 PFKPQ01813 784 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 DMP1Q13316 513 aaPredicted RBP19.18■□□□□ 0.66
MCF2L-226ENST00000486210 KMT5BQ4FZB7 885 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 ZBTB41Q5SVQ8 909 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 TPRG1Q6ZUI0 275 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 ATRIPQ8WXE1 791 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 ING5Q8WYH8 240 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 FZD8Q9H461 694 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 CLSTN2Q9H4D0 955 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 C17orf75Q9HAS0 396 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 PRMT8Q9NR22 394 aaPredicted RBP19.18■□□□□ 0.66
MCF2L-226ENST00000486210 ZFHX4Q86UP3 3567 aa19.18■□□□□ 0.66
MCF2L-226ENST00000486210 PVALEFA0A1B0GWK0 134 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 TRAK2O60296 914 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 RPN1P04843 607 aaKnown RBP19.17■□□□□ 0.66
MCF2L-226ENST00000486210 MYL1P05976 194 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 GAP43P17677 238 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 EHHADHQ08426 723 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 RAB33AQ14088 237 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 NFKBIBQ15653 356 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 SLC5A9Q2M3M2 681 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 PABPC1LQ4VXU2 614 aaKnown RBP19.17■□□□□ 0.66
MCF2L-226ENST00000486210 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
MCF2L-226ENST00000486210 SPIRE2Q8WWL2 714 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 NTPCRQ9BSD7 190 aaKnown RBP19.17■□□□□ 0.66
MCF2L-226ENST00000486210 PARD6AQ9NPB6 346 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 KMT5AQ9NQR1 393 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 SNTG2Q9NY99 539 aa19.17■□□□□ 0.66
MCF2L-226ENST00000486210 LARSQ9P2J5 1176 aaKnown RBP19.17■□□□□ 0.66
MCF2L-226ENST00000486210 ACKR2O00590 384 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 MBD3O95983 291 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 THP07101 528 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 OR1D2P34982 312 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 RPS9P46781 194 aaKnown RBP19.16■□□□□ 0.66
MCF2L-226ENST00000486210 EFNA5P52803 228 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 NCKAP1LP55160 1127 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 ELAVL2Q12926 359 aaKnown RBP19.16■□□□□ 0.66
MCF2L-226ENST00000486210 UVSSAQ2YD98 709 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 DCAF4L1Q3SXM0 396 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 TAS1R3Q7RTX0 852 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 TMEM161BQ8NDZ6 487 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 GLIS3Q8NEA6 775 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 PDZD7Q9H5P4 517 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 HEBP1Q9NRV9 189 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 ARHGAP28Q9P2N2 729 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 USP20Q9Y2K6 914 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 PCDHA5Q9Y5H7 936 aa19.16■□□□□ 0.66
MCF2L-226ENST00000486210 SPTBN2O15020 2390 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 TPRP12270 2363 aaKnown RBP19.15■□□□□ 0.66
MCF2L-226ENST00000486210 K7ENM7 598 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 ECI2O75521 394 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 RECQL4O94761 1208 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 EDN1P05305 212 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 SDHBP21912 280 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 FGFR3P22607 806 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 CASP5P51878 434 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 PDXDC1Q6P996 788 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 CD300LGQ6UXG3 332 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.15■□□□□ 0.66
MCF2L-226ENST00000486210 ZNF687Q8N1G0 1237 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 SPATA20Q8TB22 786 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 MCRS1Q96EZ8 462 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 CCDC34Q96HJ3 373 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 CCDC113Q9H0I3 377 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 MTRRQ9UBK8 725 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 SEL1LQ9UBV2 794 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 EPG5Q9HCE0 2579 aa19.15■□□□□ 0.66
MCF2L-226ENST00000486210 DCDC2BA2VCK2 349 aa19.14■□□□□ 0.65
MCF2L-226ENST00000486210 PRR5-ARHGAP8B1AHC4 643 aa19.14■□□□□ 0.65
MCF2L-226ENST00000486210 NRG2O14511 850 aaPredicted RBP19.14■□□□□ 0.65
MCF2L-226ENST00000486210 MAPTP10636 758 aaKnown RBP19.14■□□□□ 0.65
MCF2L-226ENST00000486210 TDGF1P13385 188 aa19.14■□□□□ 0.65
MCF2L-226ENST00000486210 ARHGAP8P85298 464 aa19.14■□□□□ 0.65
MCF2L-226ENST00000486210 LMNB2Q03252 620 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms