RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 CEP72Q9P209 647 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 FBXO4Q9UKT5 387 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.41
SCFD1-206ENST00000484733 FANCMQ8IYD8 2048 aa12.46□□□□□ -0.42
SCFD1-206ENST00000484733 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 MOSPD3O75425 235 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 DDIT3P35638 169 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 TWF1Q12792 350 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 GPR17Q13304 367 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 PLD1Q13393 1074 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 MAML2Q8IZL2 1156 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 TCEAL4Q96EI5 215 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 GPR88Q9GZN0 384 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 ZFP14Q9HCL3 533 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 PATJQ8NI35 1801 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 CPB1P15086 417 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 CCR2P41597 374 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 RPS9P46781 194 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 GRIN1Q05586 938 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 SPAG1Q07617 926 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 FAM78AQ5JUQ0 283 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 ZBTB41Q5SVQ8 909 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 DSTYKQ6XUX3 929 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 LARP4BQ92615 738 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 HVCN1Q96D96 273 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 ASB16Q96NS5 453 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 MSTO1Q9BUK6 570 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 ASB7Q9H672 318 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 HSFX1Q9UBD0 423 aa12.45□□□□□ -0.42
SCFD1-206ENST00000484733 MRPS17Q9Y2R5 130 aaKnown RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 MORC2Q9Y6X9 1032 aaPredicted RBP12.45□□□□□ -0.42
SCFD1-206ENST00000484733 FAM170BA6NMN3 283 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 NCAM2O15394 837 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 VNN2O95498 520 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 KRT18P05783 430 aaKnown RBP12.44□□□□□ -0.42
SCFD1-206ENST00000484733 SLFN12LQ6IEE8 588 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 SMARCD2Q92925 531 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 LRRC3Q9BY71 257 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 YIPF1Q9Y548 306 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 COL4A2P08572 1712 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 PIRO00625 290 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 LRRN2O75325 713 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 TBCAO75347 108 aaKnown RBP12.44□□□□□ -0.42
SCFD1-206ENST00000484733 CYP11A1P05108 521 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 PDCP20941 246 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
SCFD1-206ENST00000484733 PTPAQ15257 358 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 ZNF852Q6ZMS4 543 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 TPRG1Q6ZUI0 275 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 USP37Q86T82 979 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 TMEM130Q8N3G9 435 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 DEPDC1BQ8WUY9 529 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 E2F7Q96AV8 911 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 ASAH2Q9NR71 780 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 STK17AQ9UEE5 414 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 MTF2Q9Y483 593 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-206ENST00000484733 ASB3Q9Y575 518 aa12.44□□□□□ -0.42
SCFD1-206ENST00000484733 ANK1P16157 1881 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 SHISA7A6NL88 538 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 MAN2B1O00754 1011 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 NMT1P30419 496 aaKnown RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 MLLT6P55198 1093 aaPredicted RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 LILRA4P59901 499 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 UBXN2BQ14CS0 331 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 C9orf57Q5W0N0 161 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 OVOS1Q6IE37 1185 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 SENP8Q96LD8 212 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 TRMT61BQ9BVS5 477 aaKnown RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 STRA6Q9BX79 667 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 TIMM13Q9Y5L4 95 aaPredicted RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 SRPRBQ9Y5M8 271 aaKnown RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 R4GN57 208 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 COL4A3Q01955 1670 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 LAMTOR5O43504 91 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 ODC1P11926 461 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 TARSP26639 723 aaKnown RBP12.43□□□□□ -0.42
SCFD1-206ENST00000484733 GUCY2FP51841 1108 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 EPHB3P54753 998 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 FOXK2Q01167 660 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 FZD5Q13467 585 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 CENPPQ6IPU0 288 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 VITQ6UXI7 678 aa12.43□□□□□ -0.42
SCFD1-206ENST00000484733 ZNF720Q7Z2F6 126 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms