RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MAML1Q92585 1016 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 PMM1Q92871 262 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 PHACTR3Q96KR7 559 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 BTBD1Q9H0C5 482 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 SMURF2Q9HAU4 748 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 CNNM1Q9NRU3 951 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 KLHL11Q9NVR0 708 aa7.11□□□□□ -1.27
SF3B1-210ENST00000482158 MRPS18AQ9NVS2 196 aaKnown RBP7.11□□□□□ -1.27
SF3B1-210ENST00000482158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.11□□□□□ -1.27
SF3B1-210ENST00000482158 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 DNAJB5O75953 348 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 ANXA1P04083 346 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 HIBADHP31937 336 aaKnown RBP7.1□□□□□ -1.27
SF3B1-210ENST00000482158 APOBEC3AP31941 199 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-210ENST00000482158 SUMO3P55854 103 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-210ENST00000482158 R3HDM1Q15032 1099 aaKnown RBP7.1□□□□□ -1.27
SF3B1-210ENST00000482158 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 AGAP9Q5VTM2 703 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 SCAMP4Q969E2 229 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 FAM89AQ96GI7 184 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 TBCBQ99426 244 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 TLR10Q9BXR5 811 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 FNIP2Q9P278 1114 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 RAPGEFL1Q9UHV5 662 aa7.1□□□□□ -1.27
SF3B1-210ENST00000482158 ZNF185O15231 689 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 ABHD16AO95870 558 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 CKBP12277 381 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 FCER1AP12319 257 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 SERPINB3P29508 390 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 MAN2A2P49641 1150 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 CASP5P51878 434 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
SF3B1-210ENST00000482158 ZNF585AQ6P3V2 769 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 RHOT2Q8IXI1 618 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 SLC17A8Q8NDX2 589 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 NUP133Q8WUM0 1156 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 MARS2Q96GW9 593 aaKnown RBP7.09□□□□□ -1.27
SF3B1-210ENST00000482158 LOXL4Q96JB6 756 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 ADOQ96SZ5 270 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 TEX101Q9BY14 249 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 KIAA1586Q9HCI6 787 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 CHST2Q9Y4C5 530 aa7.09□□□□□ -1.27
SF3B1-210ENST00000482158 GOLGA6L6A8MZA4 724 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 F8W8V4 182 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 PLSCR1O15162 318 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 CYP27B1O15528 508 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 BRAFP15056 766 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 PRIM2P49643 509 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-210ENST00000482158 RNASE9P60153 205 aaKnown RBP7.08□□□□□ -1.28
SF3B1-210ENST00000482158 PLP2Q04941 152 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 TCF15Q12870 199 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 FZD5Q13467 585 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-210ENST00000482158 LONRF1Q17RB8 773 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 SAMD3Q8N6K7 520 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 PCSK9Q8NBP7 692 aaKnown RBP7.08□□□□□ -1.28
SF3B1-210ENST00000482158 PDPRQ8NCN5 879 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 TINAGL1Q9GZM7 467 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-210ENST00000482158 COL20A1Q9P218 1284 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 HSFX1Q9UBD0 423 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 CORO2BQ9UQ03 480 aa7.08□□□□□ -1.28
SF3B1-210ENST00000482158 AHRRA9YTQ3 701 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 BTN3A1O00481 513 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 FDXRP22570 491 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 KCNJ5P48544 419 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 AK2P54819 239 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 HS1BP3Q53T59 392 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 TSHZ3Q63HK5 1081 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 USP37Q86T82 979 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 MICU3Q86XE3 530 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 AOPEPQ8N6M6 819 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 TTC9BQ8N6N2 239 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 GJA10Q969M2 543 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 LRIG1Q96JA1 1093 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 RPS6KC1Q96S38 1066 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 MPHOSPH6Q99547 160 aaKnown RBP7.07□□□□□ -1.28
SF3B1-210ENST00000482158 ELAC2Q9BQ52 826 aaKnown RBP7.07□□□□□ -1.28
SF3B1-210ENST00000482158 IMPG2Q9BZV3 1241 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 DEF6Q9H4E7 631 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF287Q9HBT7 754 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 SRRDQ9UH36 339 aa7.07□□□□□ -1.28
SF3B1-210ENST00000482158 CNOT11Q9UKZ1 510 aaKnown RBP7.07□□□□□ -1.28
SF3B1-210ENST00000482158 RHPN2P1A8MT19 583 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 K7ESM1 405 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 KPNA5O15131 536 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 UNC5CO95185 931 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 IFIT2P09913 472 aaKnown RBP7.06□□□□□ -1.28
SF3B1-210ENST00000482158 RPL17P18621 184 aaKnown RBP7.06□□□□□ -1.28
SF3B1-210ENST00000482158 HTR3AP46098 478 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 SELENOPP49908 381 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 CTBP1Q13363 440 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 PDCD4Q53EL6 469 aaKnown RBP7.06□□□□□ -1.28
SF3B1-210ENST00000482158 C3orf38Q5JPI3 329 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 LRRC55Q6ZSA7 311 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 PPP1R32Q7Z5V6 425 aa7.06□□□□□ -1.28
SF3B1-210ENST00000482158 OR56A1Q8NGH5 318 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms