RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 ASB7Q9H672 318 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 CHST7Q9NS84 486 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 DERAQ9Y315 318 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 DOCK6Q96HP0 2047 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.58
SSBP1-210ENST00000481508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ZNF233A6NK53 670 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 PIRO00625 290 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 PDXKO00764 312 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ADAM12O43184 909 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 GFRA3O60609 400 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 IL18RAPO95256 599 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 SMC2O95347 1197 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 URODP06132 367 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CNPP09543 421 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ALADP13716 330 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CYP3A5P20815 502 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 KCNA5P22460 613 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 FGFR3P22607 806 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 GLUD2P49448 558 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 TFAMQ00059 246 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CYP24A1Q07973 514 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ADAM15Q13444 863 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 MORC3Q14149 939 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 SNRNP35Q16560 246 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CTC1Q2NKJ3 1217 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 PDE12Q6L8Q7 609 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 RSPO2Q6UXX9 243 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CEP57Q86XR8 500 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 GLYCTKQ8IVS8 523 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 EFHBQ8N7U6 833 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 C1orf127Q8N9H9 656 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 BEST2Q8NFU1 509 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 SLC22A17Q8WUG5 538 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 ZNF516Q92618 1163 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 EEF2KMTQ96G04 330 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 MTMR12Q9C0I1 747 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 KCNH6Q9H252 994 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 TLE6Q9H808 572 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CLDND1Q9NY35 253 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 CLEC1BQ9P126 229 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 SIX4Q9UIU6 781 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 BARX2Q9UMQ3 279 aaPredicted RBP11.45□□□□□ -0.58
SSBP1-210ENST00000481508 C2CD2Q9Y426 696 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 IRAK3Q9Y616 596 aa11.45□□□□□ -0.58
SSBP1-210ENST00000481508 MAP1BP46821 2468 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 H3BQ06 376 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 KIAA0391O15091 583 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 TEX28O15482 410 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 EXOC3O60645 756 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 EPCAMP16422 314 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 MCM4P33991 863 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 SNRPFP62306 86 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 DLG4P78352 724 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 PSMD6Q15008 389 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CLUL1Q15846 466 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 USP41Q3LFD5 358 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 COBLL1Q53SF7 1204 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 C1orf220Q5T0J3 134 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 ANKRD40Q6AI12 368 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 EP400NLQ6ZTU2 488 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 SLC9A9Q8IVB4 645 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 LNX1Q8TBB1 728 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CCDC127Q96BQ5 260 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 PABPC5Q96DU9 382 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CCDC34Q96HJ3 373 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 MFSD14AQ96MC6 490 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 RXFP1Q9HBX9 757 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 MRPL17Q9NRX2 175 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 RMND1Q9NWS8 449 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 DPP3Q9NY33 737 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CGNQ9P2M7 1197 aaKnown RBP11.44□□□□□ -0.58
SSBP1-210ENST00000481508 CDH22Q9UJ99 828 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 ZNF292O60281 2723 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 DENND4AQ7Z401 1863 aa11.44□□□□□ -0.58
SSBP1-210ENST00000481508 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CALUO43852 315 aaPredicted RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 AKAP3O75969 853 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 ITGB3P05106 788 aa11.43□□□□□ -0.58
SSBP1-210ENST00000481508 DLATP10515 647 aaKnown RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 POLR2BP30876 1174 aaKnown RBP11.43□□□□□ -0.58
SSBP1-210ENST00000481508 CLCN4P51793 760 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms