RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 C1orf43Q9BWL3 253 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 MRPL46Q9H2W6 279 aaKnown RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 DDX21Q9NR30 783 aaKnown RBP eCLIP4.77□□□□□ -1.65
CBX3-207ENST00000481300 FBXO34Q9NWN3 711 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 PIH1D1Q9NWS0 290 aaKnown RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 FAM30AQ9NZY2 134 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 JKAMPQ9P055 326 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 PCDHA6Q9UN73 950 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 ZCCHC6Q5VYS8 1495 aaKnown RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 CDHR4A6H8M9 788 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 SLC43A1O75387 559 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 GNAI2P04899 355 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 PHKG2P15735 406 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 PEX2P28328 305 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 KCNJ5P48544 419 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 PICALMQ13492 652 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 HDAC1Q13547 482 aaPredicted RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 GALEQ14376 348 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 MAP9Q49MG5 647 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 Q6ZRM9 215 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 ZNF365Q70YC5 407 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 PPP1R3BQ86XI6 285 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 LDLRAD3Q86YD5 345 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 PJA1Q8NG27 643 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 TBC1D15Q8TC07 691 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 ZNF483Q8TF39 744 aaPredicted RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 LARP4BQ92615 738 aaKnown RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 NT5C1BQ96P26 610 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 MNTQ99583 582 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 ZMAT3Q9HA38 289 aaKnown RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 RLIMQ9NVW2 624 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 EIF2B4Q9UI10 523 aaKnown RBP4.76□□□□□ -1.65
CBX3-207ENST00000481300 ZDHHC8Q9ULC8 765 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 TPCN1Q9ULQ1 816 aa4.76□□□□□ -1.65
CBX3-207ENST00000481300 WDR33Q9C0J8 1336 aaKnown RBP4.75□□□□□ -1.65
CBX3-207ENST00000481300 DRGXA6NNA5 263 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 RECQL4O94761 1208 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 AHSGP02765 367 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 ANXA1P04083 346 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 GJB1P08034 283 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 KITP10721 976 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 SLC7A1P30825 629 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 PHKA1P46020 1223 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 SCNN1GP51170 649 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 CHN2P52757 468 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 RABGGTBP53611 331 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 SOX8P57073 446 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 PSMC1P62191 440 aaKnown RBP4.75□□□□□ -1.65
CBX3-207ENST00000481300 NOMO3P69849 1222 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 SLC25A3Q00325 362 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 POLD3Q15054 466 aaPredicted RBP4.75□□□□□ -1.65
CBX3-207ENST00000481300 UTP14CQ5TAP6 766 aaKnown RBP4.75□□□□□ -1.65
CBX3-207ENST00000481300 CYB5RLQ6IPT4 315 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 ZNF627Q7L945 461 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 PDSS2Q86YH6 399 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 LRRC27Q9C0I9 530 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 BHMT2Q9H2M3 363 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 RSAD1Q9HA92 442 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 SLC2A4RGQ9NR83 387 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 PCDHGB6Q9Y5F9 930 aa4.75□□□□□ -1.65
CBX3-207ENST00000481300 ZNF785A8K8V0 405 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 FRS3O43559 492 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 PQBP1O60828 265 aaKnown RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 AGFG2O95081 481 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 MATN4O95460 622 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 ADH4P08319 380 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 RARBP10826 455 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 SLC6A2P23975 617 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 SLC6A4P31645 630 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 APOBEC3AP31941 199 aaPredicted RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 NHLH2Q02577 135 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 EXOSC9Q06265 439 aaKnown RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 SEMA5AQ13591 1074 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 HABP2Q14520 560 aaPredicted RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 KIF22Q14807 665 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 CSRP2Q16527 193 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 NAIF1Q69YI7 327 aaPredicted RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 SWSAP1Q6NVH7 229 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 APOA5Q6Q788 366 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 C11orf96Q7Z7L8 435 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 PCSK9Q8NBP7 692 aaKnown RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 DCLRE1CQ96SD1 692 aaKnown RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 C22orf23Q9BZE7 217 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 SIK2Q9H0K1 926 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 NUP62CLQ9H1M0 184 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.74□□□□□ -1.65
CBX3-207ENST00000481300 PARPBPQ9NWS1 579 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
CBX3-207ENST00000481300 ANO9A1A5B4 782 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 KLRG2A4D1S0 409 aaPredicted RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 DIRC3C9JPN6 131 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 APAF1O14727 1248 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 PMM2O15305 246 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 MAP4K4O95819 1239 aaPredicted RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 SPATA31D3P0C874 917 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 CKBP12277 381 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 MYF5P13349 255 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 BRAFP15056 766 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms