RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 DSTYKQ6XUX3 929 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 FRMD5Q7Z6J6 570 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 CEP57Q86XR8 500 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 OR5B17Q8NGF7 314 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 RIN2Q8WYP3 895 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 POP1Q99575 1024 aaKnown RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 DUSP9Q99956 384 aaKnown RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 ANO10Q9NW15 660 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 ARMCX3Q9UH62 379 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 DPP7Q9UHL4 492 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 DSEQ9UL01 958 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 COG5Q9UP83 839 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 PTPRJQ12913 1337 aa14.15□□□□□ -0.15
TOP3A-205ENST00000477508 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-205ENST00000477508 KPNA7A9QM74 516 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 C2CD2LO14523 706 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 CSPG5O95196 566 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 TYMPP19971 482 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 ATICP31939 592 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 NRIP1P48552 1158 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 NDUFV1P49821 464 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 HYAL1Q12794 435 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 TRPC3Q13507 836 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 COL19A1Q14993 1142 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 SKIV2LQ15477 1246 aaKnown RBP14.14□□□□□ -0.15
TOP3A-205ENST00000477508 DPCR1Q3MIW9 517 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 RTP2Q5QGT7 225 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 LMBRD2Q68DH5 695 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-205ENST00000477508 ELMSAN1Q6PJG2 1045 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 EFHBQ8N7U6 833 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 AUTS2Q8WXX7 1259 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 PABPC5Q96DU9 382 aaKnown RBP14.14□□□□□ -0.15
TOP3A-205ENST00000477508 BORCS6Q96GS4 357 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 SENP8Q96LD8 212 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 KLHL5Q96PQ7 755 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 GZF1Q9H116 711 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-205ENST00000477508 SIX4Q9UIU6 781 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 BACE2Q9Y5Z0 518 aa14.14□□□□□ -0.15
TOP3A-205ENST00000477508 I3L4J1 428 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 PPEF2O14830 753 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 STAU1O95793 577 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 C4BPAP04003 597 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 CYP11A1P05108 521 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 IGFBP6P24592 240 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 KLRC2P26717 231 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 TKTP29401 623 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 STX17P56962 302 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 YWHAHQ04917 246 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 BIRC3Q13489 604 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 PSMD5Q16401 504 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 STX1AQ16623 288 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 CTC1Q2NKJ3 1217 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 ZACNQ401N2 412 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 TMEM184AQ6ZMB5 413 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 DPH6Q7L8W6 267 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 ADGRD2Q7Z7M1 963 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 RBM23Q86U06 439 aaKnown RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 METTL23Q86XA0 190 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 LNX1Q8TBB1 728 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-205ENST00000477508 SPATA18Q8TC71 538 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 PLEKHO2Q8TD55 490 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 EEF2KMTQ96G04 330 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 HPDLQ96IR7 371 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 GDAP2Q9NXN4 497 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 TMEM63CQ9P1W3 806 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 MTRRQ9UBK8 725 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 SCN1AP35498 2009 aa14.13□□□□□ -0.15
TOP3A-205ENST00000477508 ATG2AQ2TAZ0 1938 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 CYB561D2O14569 222 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 PER2O15055 1255 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 SPTLC1O15269 473 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 TEX28O15482 410 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 HUS1O60921 280 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 CLASP2O75122 1294 aaKnown RBP14.12□□□□□ -0.15
TOP3A-205ENST00000477508 OAZ2O95190 189 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 FAM163BP0C2L3 166 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 MARSP56192 900 aaKnown RBP14.12□□□□□ -0.15
TOP3A-205ENST00000477508 DLG4P78352 724 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 ADAM15Q13444 863 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 NCOA4Q13772 614 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 MRPL58Q14197 206 aaKnown RBP14.12□□□□□ -0.15
TOP3A-205ENST00000477508 SGSM1Q2NKQ1 1148 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 CCDC40Q4G0X9 1142 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 ZNF280DQ6N043 979 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 SV2AQ7L0J3 742 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 TMEM86AQ8N2M4 240 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 HDAC7Q8WUI4 952 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 TAF4BQ92750 862 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 CASP10Q92851 521 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 HLA-CQ95604 372 aa14.12□□□□□ -0.15
TOP3A-205ENST00000477508 B3GALT6Q96L58 329 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms