RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 FPR1P21462 350 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 GUCY1A2P33402 732 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 PLCD1P51178 756 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 HNRNPMP52272 730 aaKnown RBP eCLIP3.67□□□□□ -1.82
XRN1-211ENST00000477237 NFE2L2Q16236 605 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 UGT8Q16880 541 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 CD300EQ496F6 205 aaPredicted RBP3.67□□□□□ -1.82
XRN1-211ENST00000477237 PXDC1Q5TGL8 231 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 SEM1Q6ZVN7 128 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 FKBP9P1Q75LS8 142 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 IRF2BP2Q7Z5L9 587 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 PQLC1Q8N2U9 271 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 SYNPOQ8N3V7 929 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 FITM2Q8N6M3 262 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 ACRBPQ8NEB7 543 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 GPR156Q8NFN8 814 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 GSTO2Q9H4Y5 243 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 LDAHQ9H6V9 325 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 DPP7Q9UHL4 492 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 AFG3L2Q9Y4W6 797 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 PCDHB1Q9Y5F3 818 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 SMIM35A0A1B0GVV1 85 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 CDHR4A6H8M9 788 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 FAM83GA6ND36 823 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 URI1O94763 535 aaPredicted RBP3.66□□□□□ -1.82
XRN1-211ENST00000477237 TTLL1O95922 423 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 PPP3CBP16298 524 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 ECHS1P30084 290 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 ADCYAP1R1P41586 468 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 LSSP48449 732 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 CCT8P50990 548 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 RPS7P62081 194 aaKnown RBP3.66□□□□□ -1.82
XRN1-211ENST00000477237 FPGSQ05932 587 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 DHX37Q8IY37 1157 aaKnown RBP3.66□□□□□ -1.82
XRN1-211ENST00000477237 OR2W6PQ8NHA6 318 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 NSMCE1Q8WV22 266 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 SENP6Q9GZR1 1112 aaPredicted RBP3.66□□□□□ -1.82
XRN1-211ENST00000477237 TMEM260Q9NX78 707 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
XRN1-211ENST00000477237 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 THBS3P49746 956 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 PDCD1Q15116 288 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 TCEA2Q15560 299 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 SEPT7Q16181 437 aaKnown RBP3.65□□□□□ -1.83
XRN1-211ENST00000477237 PRAMEF17Q5VTA0 474 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 CLNKQ7Z7G1 428 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 NRACQ8N912 160 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 TBC1D15Q8TC07 691 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 SLC5A5Q92911 643 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 REPS1Q96D71 796 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 C8orf37Q96NL8 207 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 EMC7Q9NPA0 242 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 KLC4Q9NSK0 619 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 AJAP1Q9UKB5 411 aaPredicted RBP3.65□□□□□ -1.83
XRN1-211ENST00000477237 ACTL7AQ9Y615 435 aa3.65□□□□□ -1.83
XRN1-211ENST00000477237 TCF20Q9UGU0 1960 aaKnown RBP3.64□□□□□ -1.83
XRN1-211ENST00000477237 NR2F6P10588 404 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 KCNA2P16389 499 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 POU3F2P20265 443 aaPredicted RBP3.64□□□□□ -1.83
XRN1-211ENST00000477237 ARHGAP25P42331 645 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 ATP13A4Q4VNC1 1196 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 FAM180AQ6UWF9 173 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 RASSF3Q86WH2 238 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 FEZ1Q99689 392 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 TARS2Q9BW92 718 aaKnown RBP3.64□□□□□ -1.83
XRN1-211ENST00000477237 ZSWIM4Q9H7M6 989 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 LANCL2Q9NS86 450 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 SH3BP4Q9P0V3 963 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 CTTNBP2NLQ9P2B4 639 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 PROCRQ9UNN8 238 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 RUVBL1Q9Y265 456 aaKnown RBP3.64□□□□□ -1.83
XRN1-211ENST00000477237 ADGRA2Q96PE1 1338 aa3.64□□□□□ -1.83
XRN1-211ENST00000477237 CYP2D7A0A087X1C5 515 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 TCRBV7S2A1N4TA0A589 114 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 PRRT4C9JH25 899 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 SMIM22K7EJ46 135 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 SOCS2O14508 198 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 EBLN1P0CF75 366 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 ALAS1P13196 640 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 PCSK1P29120 753 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 NANOS2P60321 138 aaKnown RBP3.63□□□□□ -1.83
XRN1-211ENST00000477237 DYRK1AQ13627 763 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 DAZAP2Q15038 168 aaPredicted RBP3.63□□□□□ -1.83
XRN1-211ENST00000477237 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.63□□□□□ -1.83
XRN1-211ENST00000477237 ZNF628Q5EBL2 1059 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 CNGA4Q8IV77 575 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 ADGRG5Q8IZF4 528 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 AHI1Q8N157 1196 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 PPM1KQ8N3J5 372 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 LEO1Q8WVC0 666 aaPredicted RBP3.63□□□□□ -1.83
XRN1-211ENST00000477237 UBE2Q2Q8WVN8 375 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 HOXB13Q92826 284 aaPredicted RBP3.63□□□□□ -1.83
XRN1-211ENST00000477237 RFKQ969G6 155 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 PBKQ96KB5 322 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 TLR10Q9BXR5 811 aa3.63□□□□□ -1.83
XRN1-211ENST00000477237 TOPORSQ9NS56 1045 aaPredicted RBP3.63□□□□□ -1.83
XRN1-211ENST00000477237 MYO1FO00160 1098 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 KIAA0391O15091 583 aaKnown RBP3.62□□□□□ -1.83
XRN1-211ENST00000477237 KRT86O43790 486 aa3.62□□□□□ -1.83
XRN1-211ENST00000477237 JTBO76095 146 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms