RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ISM1B1AKI9 464 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 ACKR2O00590 384 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 MTSS1O43312 755 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 ORC4O43929 436 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 TOX4O94842 621 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 CYP1A1P04798 512 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 GYPEP15421 78 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 VEGFAP15692 232 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 CTXN1P60606 82 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 GALNT1Q10472 559 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 MTM1Q13496 603 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 USP10Q14694 798 aaKnown RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 FLYWCH1Q4VC44 716 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 CCDC184Q52MB2 194 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 FAM133BQ5BKY9 247 aaKnown RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 KRT40Q6A162 431 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 C16orf54Q6UWD8 224 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 NBPF11Q86T75 865 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 RNF152Q8N8N0 203 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 UCMAQ8WVF2 138 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 STON2Q8WXE9 905 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 C18orf8Q96DM3 657 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 IQCDQ96DY2 449 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 AJUBAQ96IF1 538 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 YTHDC1Q96MU7 727 aaKnown RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 HEPHQ9BQS7 1158 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 COLEC11Q9BWP8 271 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 STK33Q9BYT3 514 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 KATNBL1Q9H079 304 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 TMEM168Q9H0V1 697 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 RSPH9Q9H1X1 276 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 PLEKHA5Q9HAU0 1116 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 HELLSQ9NRZ9 838 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 GGA3Q9NZ52 723 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 NTMQ9P121 344 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-207ENST00000476169 A0A1W2PPC4 97 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 NRP1O14786 923 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PLA2G6O60733 806 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 TBX18O95935 607 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 JUNP05412 331 aaKnown RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ZNF888P0CJ79 500 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 MYL4P12829 197 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 IL2RBP14784 551 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 NPR1P16066 1061 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PCSK1P29120 753 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 CSF2RBP32927 897 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 GUCY1A2P33402 732 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 KRT20P35900 424 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 IRAK1P51617 712 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 BPIFB4P59827 614 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ATP8B2P98198 1209 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 MYBPC2Q14324 1141 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 KHDC1LQ5JSQ8 128 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 SPECC1Q5M775 1068 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PRAMEF14Q5SWL7 426 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ARMC3Q5W041 872 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 JMJD6Q6NYC1 403 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PDXDC1Q6P996 788 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 CNKSR3Q6P9H4 555 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 FASTKD5Q7L8L6 764 aaKnown RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ATP11CQ8NB49 1132 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 FANCBQ8NB91 859 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PCYOX1LQ8NBM8 494 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 MDM1Q8TC05 714 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 CASKIN2Q8WXE0 1202 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PWWP2AQ96N64 755 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 SPATA25Q9BR10 227 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 BRIP1Q9BX63 1249 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 BARX1Q9HBU1 254 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 WASH6PQ9NQA3 447 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 SERHLQ9NQF3 203 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 AFF4Q9UHB7 1163 aaKnown RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 PCDHA6Q9UN73 950 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 RUVBL1Q9Y265 456 aaKnown RBP4.83□□□□□ -1.64
VPS13D-207ENST00000476169 ACTL7AQ9Y615 435 aa4.83□□□□□ -1.64
VPS13D-207ENST00000476169 A0A1W2PRQ8 180 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 AQP12BA6NM10 295 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 NT5C1B-RDH14C9J2C7 533 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 MYO1FO00160 1098 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 F2RL2O00254 374 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ETV2O00321 342 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 SYT5O00445 386 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 PODXLO00592 558 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TEX33O43247 280 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TMCC2O75069 709 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TIPRLO75663 272 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CD1AP06126 327 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 VSIG10L2P0DP72 767 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms