RNA–Protein interactions for RNA: ENST00000475779.1

SMO-203, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 3

Gene SMO, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-203ENST00000475779 ANKRD63C9JTQ0 380 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 PRRG1O14668 218 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
SMO-203ENST00000475779 CCL16O15467 120 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 ABLIM3O94929 683 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 IL18RAPO95256 599 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 MBD3O95983 291 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 LRG1P02750 347 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 LAMP2P13473 410 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 CPB1P15086 417 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 TYMPP19971 482 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 GARTP22102 1010 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 CMA1P23946 247 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 ELF1P32519 619 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 AMPD3Q01432 767 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 SPAG1Q07617 926 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 HTR4Q13639 388 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 PABPC1LQ4VXU2 614 aaKnown RBP13.09□□□□□ -0.31
SMO-203ENST00000475779 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 SHC4Q6S5L8 630 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 MTSS1LQ765P7 747 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 BRSK2Q8IWQ3 736 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 NOTCH4Q99466 2003 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
SMO-203ENST00000475779 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
SMO-203ENST00000475779 PANK4Q9NVE7 773 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
SMO-203ENST00000475779 CDH7Q9ULB5 785 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 POLIQ9UNA4 740 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 MYO10Q9HD67 2058 aa13.09□□□□□ -0.31
SMO-203ENST00000475779 ANO9A1A5B4 782 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 OR6C75A6NL08 312 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 EIF3DO15371 548 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMO-203ENST00000475779 OAZ2O95190 189 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
SMO-203ENST00000475779 SRFP11831 508 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 ACOT2P49753 483 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 CASP5P51878 434 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 USP37Q86T82 979 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 ZNF560Q96MR9 790 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 DSEQ9UL01 958 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 SCN1AP35498 2009 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 WDFY4Q6ZS81 3184 aa13.08□□□□□ -0.32
SMO-203ENST00000475779 CYP11A1P05108 521 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 PFKFB1P16118 471 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 ADSSP30520 456 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 PTPN5P54829 565 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 VCPP55072 806 aaKnown RBP13.07□□□□□ -0.32
SMO-203ENST00000475779 ASIC1P78348 528 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 PLD1Q13393 1074 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
SMO-203ENST00000475779 DSTYKQ6XUX3 929 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 ELMOD1Q8N336 334 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 FGF13Q92913 245 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 MFSD1Q9H3U5 465 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 NUP210Q8TEM1 1887 aaPredicted RBP13.07□□□□□ -0.32
SMO-203ENST00000475779 COL4A2P08572 1712 aa13.07□□□□□ -0.32
SMO-203ENST00000475779 DOCK6Q96HP0 2047 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 A0A1B0GVL5 298 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 PIRO00625 290 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 PPEF2O14830 753 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
SMO-203ENST00000475779 RHOP08100 348 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 PNPLA4P41247 253 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 TAF6P49848 677 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 GUCY2FP51841 1108 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 ARPP19P56211 112 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 LILRA4P59901 499 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 NTHL1P78549 312 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 NHLH1Q02575 133 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 KCNA1Q09470 495 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 SV2CQ496J9 727 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
SMO-203ENST00000475779 OVOS1Q6IE37 1185 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 FGFBP2Q9BYJ0 223 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 SLC2A4RGQ9NR83 387 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 HCFC1R1Q9NWW0 138 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 RBAKQ9NYW8 714 aaPredicted RBP13.06□□□□□ -0.32
SMO-203ENST00000475779 TBC1D7Q9P0N9 293 aa13.06□□□□□ -0.32
SMO-203ENST00000475779 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms