RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ITGAMP11215 1152 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 AVPR1BP47901 424 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 MAP2K6P52564 334 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 BLOC1S1P78537 153 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 CYP2A13Q16696 494 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 ATAT1Q5SQI0 421 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 PDSS2Q86YH6 399 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 FAM167AQ96KS9 214 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 TLR10Q9BXR5 811 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 IKZF4Q9H2S9 585 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 LMBRD1Q9NUN5 540 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 ZIM2Q9NZV7 527 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 CFAP97Q9P2B7 532 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 CDYLQ9Y232 598 aa8.23□□□□□ -1.09
SMC5-203ENST00000475540 RHOBTB3O94955 611 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 S100BP04271 92 aaPredicted RBP8.22□□□□□ -1.09
SMC5-203ENST00000475540 HKR1P10072 659 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 EGR2P11161 476 aaPredicted RBP8.22□□□□□ -1.09
SMC5-203ENST00000475540 PRDX5P30044 214 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 GRAMD1CQ8IYS0 662 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 ASB10Q8WXI3 467 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 CAVIN3Q969G5 261 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 NACC2Q96BF6 587 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 C1GALT1C1Q96EU7 318 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 KLHL32Q96NJ5 620 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 RTFDC1Q9BY42 306 aaPredicted RBP8.22□□□□□ -1.09
SMC5-203ENST00000475540 CDH19Q9H159 772 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 SLAMF7Q9NQ25 335 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 TBCCD1Q9NVR7 557 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 FEZ2Q9UHY8 353 aaPredicted RBP8.22□□□□□ -1.09
SMC5-203ENST00000475540 PACSIN3Q9UKS6 424 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 NEU2Q9Y3R4 380 aa8.22□□□□□ -1.09
SMC5-203ENST00000475540 AP1G1O43747 822 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 RFPL1O75677 317 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 HSPA6P17066 643 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 PIK3CGP48736 1102 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 PIGFQ07326 219 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 GPR149Q86SP6 731 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 SH2D3CQ8N5H7 860 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 TMIEQ8NEW7 156 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 FUBP1Q96AE4 644 aaKnown RBP8.21□□□□□ -1.1
SMC5-203ENST00000475540 COQ10AQ96MF6 247 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 PNPOQ9NVS9 261 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 RLIMQ9NVW2 624 aa8.21□□□□□ -1.1
SMC5-203ENST00000475540 H3BUI4 141 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 GJB1P08034 283 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 VAV2P52735 878 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 GTF2H3Q13889 308 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 Q6YL49 198 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 CLNKQ7Z7G1 428 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 CFAP52Q8N1V2 620 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 SCAMP4Q969E2 229 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 CDK5RAP3Q96JB5 506 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 AIFM3Q96NN9 605 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 C1orf43Q9BWL3 253 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 UNKLQ9H9P5 680 aaKnown RBP8.2□□□□□ -1.1
SMC5-203ENST00000475540 THRAP3Q9Y2W1 955 aaKnown RBP8.2□□□□□ -1.1
SMC5-203ENST00000475540 DMRT1Q9Y5R6 373 aa8.2□□□□□ -1.1
SMC5-203ENST00000475540 GRID2IPA4D2P6 1211 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 TYRP14679 529 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 KCNA2P16389 499 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 PSMC1P62191 440 aaKnown RBP8.19□□□□□ -1.1
SMC5-203ENST00000475540 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
SMC5-203ENST00000475540 FPGSQ05932 587 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 HECTD2Q5U5R9 776 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 Q8NA96 180 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 PDPRQ8NCN5 879 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 BEND2Q8NDZ0 799 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
SMC5-203ENST00000475540 PTCD3Q96EY7 689 aaKnown RBP8.19□□□□□ -1.1
SMC5-203ENST00000475540 LRGUKQ96M69 825 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 SMOQ99835 787 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 MRPL46Q9H2W6 279 aaKnown RBP8.19□□□□□ -1.1
SMC5-203ENST00000475540 SLC12A5Q9H2X9 1139 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 TOR3AQ9H497 397 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 NMRK2Q9NPI5 230 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 CASS4Q9NQ75 786 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 NR2E3Q9Y5X4 410 aa8.19□□□□□ -1.1
SMC5-203ENST00000475540 FDXRP22570 491 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 TGM1P22735 817 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 SCAPQ12770 1279 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 ZNF267Q14586 743 aaPredicted RBP8.18□□□□□ -1.1
SMC5-203ENST00000475540 SP5Q6BEB4 398 aaPredicted RBP8.18□□□□□ -1.1
SMC5-203ENST00000475540 CAMKK1Q8N5S9 505 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
SMC5-203ENST00000475540 Q96MF0 132 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 SIK2Q9H0K1 926 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 SYBUQ9NX95 663 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 ZDHHC8Q9ULC8 765 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 PCDHA1Q9Y5I3 950 aa8.18□□□□□ -1.1
SMC5-203ENST00000475540 TRGV11A0A075B6L2 103 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 PRAMEF33A0A0G2JMD5 474 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 CCDC195A0A1B0GUA6 201 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 A0A1W2PS29 197 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 PRAMEF10O60809 474 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 ZFPL1O95159 310 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 ALDH2P05091 517 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms