RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 SV2CQ496J9 727 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 KIAA0319Q5VV43 1072 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 KIAA1841Q6NSI8 718 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 C15orf39Q6ZRI6 1047 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 ADGRD2Q7Z7M1 963 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 MRPL43Q8N983 215 aaKnown RBP16.97■□□□□ 0.31
COL1A1-204ENST00000474644 TTPALQ9BTX7 342 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 MRPL17Q9NRX2 175 aaKnown RBP16.97■□□□□ 0.31
COL1A1-204ENST00000474644 IRAK3Q9Y616 596 aa16.97■□□□□ 0.31
COL1A1-204ENST00000474644 C2orf71A6NGG8 1288 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 C2CD2LO14523 706 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 SYN3O14994 580 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 LILRB3O75022 631 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 VNN1O95497 513 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 CXCL14O95715 111 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 CCDC192P0DO97 292 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.31
COL1A1-204ENST00000474644 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-204ENST00000474644 ANO6Q4KMQ2 910 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 TCEAL5Q5H9L2 206 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 DSTYKQ6XUX3 929 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 SV2AQ7L0J3 742 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 CEP57Q86XR8 500 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 RIN2Q8WYP3 895 aaPredicted RBP16.96■□□□□ 0.31
COL1A1-204ENST00000474644 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 SLC35C1Q96A29 364 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 SENP8Q96LD8 212 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 CNOT6LQ96LI5 555 aaKnown RBP16.96■□□□□ 0.31
COL1A1-204ENST00000474644 MMRN2Q9H8L6 949 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 PCDHB8Q9UN66 801 aa16.96■□□□□ 0.31
COL1A1-204ENST00000474644 R3HCC1Q9Y3T6 440 aaKnown RBP16.96■□□□□ 0.31
COL1A1-204ENST00000474644 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 STX10O60499 249 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 PHACTR2O75167 634 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 CST3P01034 146 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-204ENST00000474644 GTF2H1P32780 548 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 MXI1P50539 228 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 MYO1EQ12965 1108 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 TRPC3Q13507 836 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 PRSS55Q6UWB4 352 aaPredicted RBP16.95■□□□□ 0.3
COL1A1-204ENST00000474644 IRF2BP1Q8IU81 584 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 GPR65Q8IYL9 337 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
COL1A1-204ENST00000474644 HPDLQ96IR7 371 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 THAP9Q9H5L6 903 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 TMEM8AQ9HCN3 771 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 SSX2IPQ9Y2D8 614 aa16.95■□□□□ 0.3
COL1A1-204ENST00000474644 TSC2P49815 1807 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 STAU1O95793 577 aaKnown RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 ODC1P11926 461 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 NRIP1P48552 1158 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 MYL6P60660 151 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 NCOA4Q13772 614 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 PSMD5Q16401 504 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 VARS2Q5ST30 1063 aaKnown RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 KRT39Q6A163 491 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 APPL2Q8NEU8 664 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 PPP2R3CQ969Q6 453 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 XYLT2Q9H1B5 865 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 RXFP1Q9HBX9 757 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 NFE2L3Q9Y4A8 694 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 TIMM13Q9Y5L4 95 aaPredicted RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
COL1A1-204ENST00000474644 VWA8A3KMH1 1905 aa16.94■□□□□ 0.3
COL1A1-204ENST00000474644 SCN1AP35498 2009 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CYB561D2O14569 222 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 RPL17P18621 184 aaKnown RBP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 TYMPP19971 482 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 ATICP31939 592 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 MYL5Q02045 173 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CREMQ03060 361 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 HYAL1Q12794 435 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CCDC85BQ15834 202 aaPredicted RBP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 ZNF699Q32M78 642 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 FAM114A1Q8IWE2 563 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 KLHL5Q96PQ7 755 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 EMILIN2Q9BXX0 1053 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 NAT10Q9H0A0 1025 aaKnown RBP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 SAMSN1Q9NSI8 373 aaKnown RBP16.93■□□□□ 0.3
COL1A1-204ENST00000474644 GDAP2Q9NXN4 497 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
COL1A1-204ENST00000474644 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 PER2O15055 1255 aa16.92■□□□□ 0.3
COL1A1-204ENST00000474644 TEX28O15482 410 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms