RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CREB3O43889 395 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 MAGEC1O60732 1142 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PEX11AO75192 247 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ASMTLO95671 621 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PENKP01210 267 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 GOLGA8HP0CJ92 632 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 IL1R1P14778 569 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PTPN7P35236 360 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PEX19P40855 299 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PTDSS1P48651 473 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 AP2B1P63010 937 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 FKBP1BP68106 108 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TAP1Q03518 808 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 AP1B1Q10567 949 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 PPP2R5CQ13362 524 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ITGA9Q13797 1035 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 CLEC16AQ2KHT3 1053 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TRMT5Q32P41 509 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 LRRC23Q53EV4 343 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 HSP90AA5PQ58FG0 334 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 LRRC38Q5VT99 294 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 AAGABQ6PD74 315 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF720Q7Z2F6 126 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ADGRG6Q86SQ4 1221 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 NOP9Q86U38 636 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TRABD2AQ86V40 505 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ECHDC2Q86YB7 292 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 RHOT1Q8IXI2 618 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 FAM71AQ8IYT1 594 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 RPUSD2Q8IZ73 545 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ST13P4Q8IZP2 240 aaPredicted RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 SYCP3Q8IZU3 236 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 VPS52Q8N1B4 723 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 MYCT1Q8N699 235 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ANKRD42Q8N9B4 389 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 FAM13CQ8NE31 585 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 EXD1Q8NHP7 514 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 CRYGNQ8WXF5 182 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 MKL1Q969V6 931 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 DYNLL2Q96FJ2 89 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ACCSQ96QU6 501 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 BTBD10Q9BSF8 475 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TBC1D10AQ9BXI6 508 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 OSBPL8Q9BZF1 889 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 STN1Q9H668 368 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 DNAJC18Q9H819 358 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 GPAMQ9HCL2 828 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 AGPAT3Q9NRZ7 376 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 NYAP2Q9P242 653 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 WDR35Q9P2L0 1181 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 BCAP29Q9UHQ4 241 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 SERPINB13Q9UIV8 391 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 TMCO1Q9UM00 188 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 DRG1Q9Y295 367 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
CCDC93-208ENST00000474546 SMIM31A0A1B0GVY4 71 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SNAP23O00161 211 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 KLF11O14901 512 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ADAMTS3O15072 1205 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 GYG2O15488 501 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 GPR37L1O60883 481 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 MED24O75448 989 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NPM3O75607 178 aaKnown RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 HAUS5O94927 633 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 TJP3O95049 919 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ACSL3O95573 720 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 LINGO3P0C6S8 592 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 MAPK4P31152 587 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF76P36508 570 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SLCO1A2P46721 670 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SERPINB4P48594 390 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 RAB27AP51159 221 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 VAMP7P51809 220 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NHLH1Q02575 133 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 DEUP1Q05D60 604 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 GABPAQ06546 454 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SPIRE1Q08AE8 756 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 GRAPQ13588 217 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 MESDQ14696 234 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 LONRF1Q17RB8 773 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 LGSNQ5TDP6 509 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 ACAD10Q6JQN1 1059 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 RINT1Q6NUQ1 792 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 TMEM154Q6P9G4 183 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 C4orf50Q6ZRC1 276 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 LONP2Q86WA8 852 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 CHSY1Q86X52 802 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 MAPKAPK5Q8IW41 473 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SRRM1Q8IYB3 904 aaKnown RBP8.48□□□□□ -1.05
CCDC93-208ENST00000474546 KATNAL2Q8IYT4 538 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 SAMD3Q8N6K7 520 aa8.48□□□□□ -1.05
CCDC93-208ENST00000474546 CNBD1Q8NA66 436 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms