RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CROCCP2Q86T23 111 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TAX1BP1Q86VP1 789 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 CEP57Q86XR8 500 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 SRRM1Q8IYB3 904 aaKnown RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TCP11Q8WWU5 503 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TMEM143Q96AN5 459 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 OSBPL8Q9BZF1 889 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 HOMER3Q9NSC5 361 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 HGSO14964 777 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 GAS8O95995 478 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 SLC1A1P43005 524 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 PSMC4P43686 418 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 FSTL1Q12841 308 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 OR5B17Q8NGF7 314 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ACSF2Q96CM8 615 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 SENP7Q9BQF6 1050 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 PLVAPQ9BX97 442 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 STMN4Q9H169 189 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 USP15Q9Y4E8 981 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 EXTL3O43909 919 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
C9orf3-214ENST00000473778 DGAT1O75907 488 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 FOXN2P32314 431 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 PIK3CAP42336 1068 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 BIRC2Q13490 618 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 PSMD6Q15008 389 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 CCNG2Q16589 344 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 MTERF2Q49AM1 385 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 IZUMO3Q5VZ72 239 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 CYP4F22Q6NT55 531 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 MIS18BP1Q6P0N0 1132 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ENOSF1Q7L5Y1 443 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 KIF9Q9HAQ2 790 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 C17orf75Q9HAS0 396 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 MYOZ2Q9NPC6 264 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 MAP3K20Q9NYL2 800 aaKnown RBP11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 PRKAG3Q9UGI9 489 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 MCM8Q9UJA3 840 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 DNPEPQ9ULA0 475 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 TRIM33Q9UPN9 1127 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 SIP14410 1827 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 TCEA3O75764 348 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 NEBLO76041 1014 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 GSTA1P08263 222 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 GNA15P30679 374 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 LIG4P49917 911 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ACTR2P61160 394 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 OGDHQ02218 1023 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 CUL2Q13617 745 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 P3H1Q32P28 736 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 C11orf91Q3C1V1 193 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 KAZNQ674X7 775 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 PLEKHA7Q6IQ23 1121 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 KIF2BQ8N4N8 673 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 TTLL6Q8N841 843 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 REPS2Q8NFH8 660 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 N4BP2L2Q92802 583 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-214ENST00000473778 FAXDC2Q96IV6 333 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 ADAM33Q9BZ11 813 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 LGALS13Q9UHV8 139 aa11.61□□□□□ -0.55
C9orf3-214ENST00000473778 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-214ENST00000473778 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 MGAMO43451 1857 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 A8MUI8 341 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 CLTAP09496 248 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 MYBL1P10243 752 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ACCSLQ4AC99 568 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ABHD15Q6UXT9 468 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 SYDE1Q6ZW31 735 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF677Q86XU0 584 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 RHOT1Q8IXI2 618 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 KATNAL2Q8IYT4 538 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 CCDC63Q8NA47 563 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 GRK7Q8WTQ7 553 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 MAML1Q92585 1016 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 GPRASP2Q96D09 838 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 TBC1D31Q96DN5 1066 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 FAM81BQ96LP2 452 aa11.6□□□□□ -0.55
C9orf3-214ENST00000473778 TGS1Q96RS0 853 aaKnown RBP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 RBM15Q96T37 977 aaKnown RBP eCLIP11.6□□□□□ -0.55
C9orf3-214ENST00000473778 ATP6V0A4Q9HBG4 840 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms