RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 AGO2Q9UKV8 859 aaKnown RBP19.6■□□□□ 0.73
SNX4-204ENST00000473417 BACE2Q9Y5Z0 518 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 CDY1Q9Y6F8 540 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 CACNA1HO95180 2353 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 FAM189A1O60320 539 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 HOXD13P35453 343 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 ACOT2P49753 483 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 TCF15Q12870 199 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 STK4Q13043 487 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 PSMD2Q13200 908 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 PNOCQ13519 176 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 KYAT1Q16773 422 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 PPM1LQ5SGD2 360 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 GET4Q7L5D6 327 aaPredicted RBP19.59■□□□□ 0.73
SNX4-204ENST00000473417 CCDC47Q96A33 483 aaKnown RBP19.59■□□□□ 0.73
SNX4-204ENST00000473417 C18orf25Q96B23 403 aaPredicted RBP19.59■□□□□ 0.73
SNX4-204ENST00000473417 RPF1Q9H9Y2 349 aaKnown RBP19.59■□□□□ 0.73
SNX4-204ENST00000473417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.59■□□□□ 0.738e-6■■□□□ 11.6
SNX4-204ENST00000473417 USP34Q70CQ2 3546 aa19.59■□□□□ 0.73
SNX4-204ENST00000473417 POU2F2P09086 479 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 RPL9P32969 192 aaKnown RBP19.58■□□□□ 0.72
SNX4-204ENST00000473417 NUBP1P53384 320 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 UBE2HP62256 183 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 SPAG1Q07617 926 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 ENOX2Q16206 610 aaKnown RBP19.58■□□□□ 0.72
SNX4-204ENST00000473417 GRASPQ7Z6J2 395 aaPredicted RBP19.58■□□□□ 0.72
SNX4-204ENST00000473417 KIAA0895Q8NCT3 520 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 SLC7A14Q8TBB6 771 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 FAM212AQ96EL1 285 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 CBWD1Q9BRT8 395 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 IRF2BPLQ9H1B7 796 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 PCIF1Q9H4Z3 704 aa19.58■□□□□ 0.72
SNX4-204ENST00000473417 CPSF3Q9UKF6 684 aaKnown RBP19.58■□□□□ 0.72
SNX4-204ENST00000473417 LACTBL1A8MY62 500 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 TULP1O00294 542 aaPredicted RBP19.57■□□□□ 0.72
SNX4-204ENST00000473417 SYN3O14994 580 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 KINO60870 393 aaKnown RBP19.57■□□□□ 0.72
SNX4-204ENST00000473417 LAMP2P13473 410 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 GARTP22102 1010 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 UVSSAQ2YD98 709 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 VARS2Q5ST30 1063 aaKnown RBP19.57■□□□□ 0.72
SNX4-204ENST00000473417 SLC8B1Q6J4K2 584 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 ARMCX5Q6P1M9 558 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 RTL10Q7L3V2 364 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 TMEM105Q8N8V8 129 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 NOC3LQ8WTT2 800 aaKnown RBP19.57■□□□□ 0.72
SNX4-204ENST00000473417 RSAD2Q8WXG1 361 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 ERCC4Q92889 916 aaPredicted RBP19.57■□□□□ 0.72
SNX4-204ENST00000473417 NXPE3Q969Y0 559 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 SAAL1Q96ER3 474 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 PLEKHA5Q9HAU0 1116 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 TUBGCP4Q9UGJ1 667 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 MIA3Q5JRA6 1907 aa19.57■□□□□ 0.72
SNX4-204ENST00000473417 UBE4BO95155 1302 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 TTC26A0AVF1 554 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 GOLGA8IPA6NC78 632 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 GOLGA8JA6NMD2 632 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 CCL16O15467 120 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 TGFB1I1O43294 461 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 NARSO43776 548 aaKnown RBP19.56■□□□□ 0.72
SNX4-204ENST00000473417 TBC1D4O60343 1298 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 XYLBO75191 536 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 RHOBTB3O94955 611 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 FSHRP23945 695 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 ROR1Q01973 937 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 PPP2R3AQ06190 1150 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 BMT2Q1RMZ1 405 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 CWF19L1Q69YN2 538 aaKnown RBP19.56■□□□□ 0.72
SNX4-204ENST00000473417 ZSWIM2Q8NEG5 633 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 SUSD3Q96L08 255 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 FAM213AQ9BRX8 229 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 NUB1Q9Y5A7 615 aa19.56■□□□□ 0.72
SNX4-204ENST00000473417 ZFP37Q9Y6Q3 630 aaPredicted RBP19.56■□□□□ 0.72
SNX4-204ENST00000473417 ANHXE9PGG2 379 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 SCN1AP35498 2009 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 CLCN5P51795 746 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 NTHL1P78549 312 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 HTR4Q13639 388 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 MRPL58Q14197 206 aaKnown RBP19.55■□□□□ 0.72
SNX4-204ENST00000473417 KCNB1Q14721 858 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 KNOP1Q1ED39 458 aaKnown RBP19.55■□□□□ 0.72
SNX4-204ENST00000473417 ASTLQ6HA08 431 aaPredicted RBP19.55■□□□□ 0.72
SNX4-204ENST00000473417 CRELD2Q6UXH1 353 aaPredicted RBP19.55■□□□□ 0.72
SNX4-204ENST00000473417 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 KIF12Q96FN5 646 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 MFSD1Q9H3U5 465 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 AGPAT3Q9NRZ7 376 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 HOOK1Q9UJC3 728 aaKnown RBP19.55■□□□□ 0.72
SNX4-204ENST00000473417 MYO15AQ9UKN7 3530 aa19.55■□□□□ 0.72
SNX4-204ENST00000473417 WDR27A2RRH5 827 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 CLIC2O15247 247 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 ABLIM3O94929 683 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 LRPAP1P30533 357 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 MCM4P33991 863 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 ZBTB6Q15916 424 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 ZNF461Q8TAF7 563 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 PHOX2BQ99453 314 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms