RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 ABHD15Q6UXT9 468 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 SND1Q7KZF4 910 aaKnown RBP eCLIP1.96□□□□□ -2.1
SHQ1-204ENST00000468347 SNX33Q8WV41 574 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 MMS19Q96T76 1030 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 PCIF1Q9H4Z3 704 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 HEY2Q9UBP5 337 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 LDLRP01130 860 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 FAM163BP0C2L3 166 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 PCSK6P29122 969 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 GPR15P49685 360 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 NRG3P56975 720 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 RPS7P62081 194 aaKnown RBP1.95□□□□□ -2.1
SHQ1-204ENST00000468347 KEAP1Q14145 624 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 TMEM177Q53S58 311 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 CCDC178Q5BJE1 867 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 FBXO41Q8TF61 875 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 NUDCD2Q8WVJ2 157 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 GAB3Q8WWW8 586 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 EGLN1Q9GZT9 426 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 USP18Q9UMW8 372 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 ZMYM2Q9UBW7 1377 aa1.95□□□□□ -2.1
SHQ1-204ENST00000468347 ADCY6O43306 1168 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 TBX6O95947 436 aaPredicted RBP1.94□□□□□ -2.1
SHQ1-204ENST00000468347 SUMO1P63165 101 aaKnown RBP1.94□□□□□ -2.1
SHQ1-204ENST00000468347 NOMO3P69849 1222 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 FPGSQ05932 587 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 NOMO1Q15155 1222 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 ARHGAP44Q17R89 818 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 NOMO2Q5JPE7 1267 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 ZNF572Q7Z3I7 529 aaPredicted RBP1.94□□□□□ -2.1
SHQ1-204ENST00000468347 MYPOPQ86VE0 399 aaPredicted RBP1.94□□□□□ -2.1
SHQ1-204ENST00000468347 B3GALNT2Q8NCR0 500 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 NUP133Q8WUM0 1156 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 ZNF414Q96IQ9 312 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 MRI1Q9BV20 369 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 ALG8Q9BVK2 526 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 ATRNL1Q5VV63 1379 aa1.94□□□□□ -2.1
SHQ1-204ENST00000468347 RTL8CO15255 209 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 TMEM127O75204 238 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 JUPP14923 745 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ALOX15P16050 662 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ZFXP17010 805 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 NDUFB7P17568 137 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 PTPN7P35236 360 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 MEF2AQ02078 507 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 CD300EQ496F6 205 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 MEX3CQ5U5Q3 659 aaKnown RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ESRP1Q6NXG1 681 aaKnown RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ZNF551Q7Z340 670 aaPredicted RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ZNF804AQ7Z570 1209 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 CLNKQ7Z7G1 428 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 GLB1L2Q8IW92 636 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 LRRC47Q8N1G4 583 aaKnown RBP1.93□□□□□ -2.1
SHQ1-204ENST00000468347 ARFGAP1Q8N6T3 406 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 RITA1Q96K30 269 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 CDCP1Q9H5V8 836 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 FBXO34Q9NWN3 711 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 HS3ST3B1Q9Y662 390 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 MRVI1Q9Y6F6 885 aa1.93□□□□□ -2.1
SHQ1-204ENST00000468347 WNT10BO00744 389 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 LDB3O75112 727 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 NPTXRO95502 500 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 RHOP08100 348 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 PFKMP08237 780 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 CYP19A1P11511 503 aaPredicted RBP1.92□□□□□ -2.1
SHQ1-204ENST00000468347 SLFN5Q08AF3 891 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 AARS2Q5JTZ9 985 aaKnown RBP1.92□□□□□ -2.1
SHQ1-204ENST00000468347 KIAA1958Q8N8K9 716 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 CTCFLQ8NI51 663 aaPredicted RBP1.92□□□□□ -2.1
SHQ1-204ENST00000468347 ZNF480Q8WV37 535 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 ATP2A3Q93084 1043 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 BCL11AQ9H165 835 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 PRKAG3Q9UGI9 489 aa1.92□□□□□ -2.1
SHQ1-204ENST00000468347 A0A0B4J293 547 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 FZD9O00144 591 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 ELL2O00472 640 aaPredicted RBP1.91□□□□□ -2.1
SHQ1-204ENST00000468347 DSCR3O14972 297 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 DDNO94850 711 aaPredicted RBP1.91□□□□□ -2.1
SHQ1-204ENST00000468347 MECP2P51608 486 aaKnown RBP1.91□□□□□ -2.1
SHQ1-204ENST00000468347 GHRHRQ02643 423 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 RBM23Q86U06 439 aaKnown RBP1.91□□□□□ -2.1
SHQ1-204ENST00000468347 SPATA2LQ8IUW3 424 aaPredicted RBP1.91□□□□□ -2.1
SHQ1-204ENST00000468347 ZZZ3Q8IYH5 903 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 IGSF22Q8N9C0 903 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 MED30Q96HR3 178 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 ZBTB40Q9NUA8 1239 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 EHD3Q9NZN3 535 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 NCKIPSDQ9NZQ3 722 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 NR2E3Q9Y5X4 410 aa1.91□□□□□ -2.1
SHQ1-204ENST00000468347 TRBV23-1A0A0A0MS06 115 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 CD19P15391 556 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 KCNA2P16389 499 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 KCNA6P17658 529 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 GM2AP17900 193 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 CANXP27824 592 aaKnown RBP1.9□□□□□ -2.11
SHQ1-204ENST00000468347 DYRK1AQ13627 763 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 RASA3Q14644 834 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 PITRM1Q5JRX3 1037 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 AFMIDQ63HM1 303 aa1.9□□□□□ -2.11
SHQ1-204ENST00000468347 PDXDC1Q6P996 788 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms