RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 POP1Q99575 1024 aaKnown RBP21.33■■□□□ 1.01
COL9A3-204ENST00000463487 OXCT2Q9BYC2 517 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-204ENST00000463487 TMEM63CQ9P1W3 806 aa21.33■■□□□ 1.01
COL9A3-204ENST00000463487 FNIP2Q9P278 1114 aa21.33■■□□□ 1.01
COL9A3-204ENST00000463487 HIDE1A8MVS5 230 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 KPNA7A9QM74 516 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 I3L4J1 428 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 M0QZQ0 153 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 CCDC192P0DO97 292 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 KLRC2P26717 231 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 GTF2H1P32780 548 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 NDUFV1P49821 464 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 YWHAHQ04917 246 aaPredicted RBP21.32■■□□□ 1
COL9A3-204ENST00000463487 PSMD5Q16401 504 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 DUSP6Q16828 381 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 RTP2Q5QGT7 225 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 TCERG1LQ5VWI1 586 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 CD300LGQ6UXG3 332 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 FRMD5Q7Z6J6 570 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 METTL23Q86XA0 190 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 SENP8Q96LD8 212 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 DUSP9Q99956 384 aaKnown RBP21.32■■□□□ 1
COL9A3-204ENST00000463487 IGFLR1Q9H665 355 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 DPP7Q9UHL4 492 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 PCDHGC5Q9Y5F6 944 aa21.32■■□□□ 1
COL9A3-204ENST00000463487 PPEF2O14830 753 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 TYMPP19971 482 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 TKTP29401 623 aaKnown RBP21.31■■□□□ 1
COL9A3-204ENST00000463487 ATICP31939 592 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 HYAL1Q12794 435 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 DCAF17Q5H9S7 520 aaPredicted RBP21.31■■□□□ 1
COL9A3-204ENST00000463487 ZNF280DQ6N043 979 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 ADGRD2Q7Z7M1 963 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 EFHBQ8N7U6 833 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 CCDC150Q8NCX0 1101 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 HPDLQ96IR7 371 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 B3GALT6Q96L58 329 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 SRRTQ9BXP5 876 aaKnown RBP21.31■■□□□ 1
COL9A3-204ENST00000463487 IMPG2Q9BZV3 1241 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 RXFP1Q9HBX9 757 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 COG5Q9UP83 839 aa21.31■■□□□ 1
COL9A3-204ENST00000463487 TRANK1O15050 2925 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 ATG2AQ2TAZ0 1938 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 CYB561D2O14569 222 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 HUS1O60921 280 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 CNPP09543 421 aaKnown RBP21.3■■□□□ 1
COL9A3-204ENST00000463487 DLG4P78352 724 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 VARS2Q5ST30 1063 aaKnown RBP21.3■■□□□ 1
COL9A3-204ENST00000463487 EP400NLQ6ZTU2 488 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 FAM114A1Q8IWE2 563 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 PLEKHO2Q8TD55 490 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 PABPC5Q96DU9 382 aaKnown RBP21.3■■□□□ 1
COL9A3-204ENST00000463487 KLHL5Q96PQ7 755 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 NAT10Q9H0A0 1025 aaKnown RBP21.3■■□□□ 1
COL9A3-204ENST00000463487 TMEM8AQ9HCN3 771 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 MTRRQ9UBK8 725 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 SIX4Q9UIU6 781 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 BACE2Q9Y5Z0 518 aa21.3■■□□□ 1
COL9A3-204ENST00000463487 PER2O15055 1255 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 LILRB3O75022 631 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 C1RP00736 705 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 TRIM49P0CI25 452 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 TRIM49CP0CI26 452 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 P4HA1P13674 534 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 PIK3CAP42336 1068 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 NCOA4Q13772 614 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 ZACNQ401N2 412 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 TDRD10Q5VZ19 366 aaKnown RBP21.29■■□□□ 1
COL9A3-204ENST00000463487 OVOS1Q6IE37 1185 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 PRSS55Q6UWB4 352 aaPredicted RBP21.29■■□□□ 1
COL9A3-204ENST00000463487 SV2AQ7L0J3 742 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 LNX1Q8TBB1 728 aaPredicted RBP21.29■■□□□ 1
COL9A3-204ENST00000463487 ZNF516Q92618 1163 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 TAF4BQ92750 862 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 HLA-CQ95604 372 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 BORCS6Q96GS4 357 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 GZF1Q9H116 711 aaPredicted RBP21.29■■□□□ 1
COL9A3-204ENST00000463487 GDAP2Q9NXN4 497 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 CLDND1Q9NY35 253 aa21.29■■□□□ 1
COL9A3-204ENST00000463487 MAGEC2Q9UBF1 373 aaPredicted RBP21.29■■□□□ 1
COL9A3-204ENST00000463487 MYO7AQ13402 2215 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 SPDYE4A6NLX3 237 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 SPTLC1O15269 473 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 TEX28O15482 410 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 N4BP1O75113 896 aaKnown RBP21.28■■□□□ 1
COL9A3-204ENST00000463487 CLASP2O75122 1294 aaKnown RBP21.28■■□□□ 1
COL9A3-204ENST00000463487 STAU1O95793 577 aaKnown RBP21.28■■□□□ 1
COL9A3-204ENST00000463487 C4BPAP04003 597 aaKnown RBP21.28■■□□□ 1
COL9A3-204ENST00000463487 CYP11A1P05108 521 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 IGFBP6P24592 240 aaPredicted RBP21.28■■□□□ 1
COL9A3-204ENST00000463487 MXI1P50539 228 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 TNNC1P63316 161 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 ZNF699Q32M78 642 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 CTXN3Q4LDR2 81 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 KRT39Q6A163 491 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 DPH6Q7L8W6 267 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 THEM5Q8N1Q8 247 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 TMEM86AQ8N2M4 240 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 TMEM130Q8N3G9 435 aa21.28■■□□□ 1
COL9A3-204ENST00000463487 CXorf38Q8TB03 319 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms