RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FRMD3A2A2Y4 597 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 SPTLC2O15270 562 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 AOC1P19801 751 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 LILRA4P59901 499 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 ADCY1Q08828 1119 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 KCNA1Q09470 495 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 POSTNQ15063 836 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 SLC5A9Q2M3M2 681 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 L1TD1Q5T7N2 865 aaKnown RBP20.55■□□□□ 0.88
VARS-220ENST00000461874 MTSS1LQ765P7 747 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 GPR152Q8TDT2 470 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 POMGNT1Q8WZA1 660 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 ZNF396Q96N95 335 aaPredicted RBP20.55■□□□□ 0.88
VARS-220ENST00000461874 ACCSQ96QU6 501 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 OLFML3Q9NRN5 406 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 EXOC7Q9UPT5 735 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 C2CD2Q9Y426 696 aa20.55■□□□□ 0.88
VARS-220ENST00000461874 NOTCH4Q99466 2003 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PIRO00625 290 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PI15O43692 258 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PPP6R2O75170 966 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 IDEP14735 1019 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 CPB1P15086 417 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 TYMPP19971 482 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PAX3P23760 479 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 C9orf57Q5W0N0 161 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 CRELD2Q6UXH1 353 aaPredicted RBP20.54■□□□□ 0.88
VARS-220ENST00000461874 RNF19BQ6ZMZ0 732 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 USP37Q86T82 979 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PDILTQ8N807 584 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 ING5Q8WYH8 240 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 GDE1Q9NZC3 331 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 CA14Q9ULX7 337 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 PCDHB13Q9Y5F0 798 aa20.54■□□□□ 0.88
VARS-220ENST00000461874 ANO9A1A5B4 782 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 OR6C75A6NL08 312 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 H0Y858 1186 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 SPTLC1O15269 473 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 GCNT3O95395 438 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 CASP5P51878 434 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 GPC5P78333 572 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 OVOS1Q6IE37 1185 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 SENP8Q96LD8 212 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 CORO1BQ9BR76 489 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 PANK4Q9NVE7 773 aa20.53■□□□□ 0.88
VARS-220ENST00000461874 VNN2O95498 520 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 YEATS4O95619 227 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 OR4Q2P0C623 313 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 PDIA4P13667 645 aaKnown RBP20.52■□□□□ 0.88
VARS-220ENST00000461874 TWF1Q12792 350 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 ALCAMQ13740 583 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 PRSS36Q5K4E3 855 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 POTEHQ6S545 545 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 ATOH1Q92858 354 aaPredicted RBP20.52■□□□□ 0.88
VARS-220ENST00000461874 MCRS1Q96EZ8 462 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 ARHGEF3Q9NR81 526 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 FAM86C1Q9NVL1 165 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 CEP72Q9P209 647 aa20.52■□□□□ 0.88
VARS-220ENST00000461874 STK25O00506 426 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 ZNF197O14709 1029 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 MICAL2O94851 1124 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 IL18RAPO95256 599 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 ODC1P11926 461 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 CEBPBP17676 345 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 GPR17Q13304 367 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 E2F4Q16254 413 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 FOXD4L5Q5VV16 416 aaPredicted RBP20.51■□□□□ 0.87
VARS-220ENST00000461874 ELMOD1Q8N336 334 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
VARS-220ENST00000461874 TCEAL4Q96EI5 215 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 ZNF512Q96ME7 567 aaPredicted RBP20.51■□□□□ 0.87
VARS-220ENST00000461874 KXD1Q9BQD3 176 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 FAM213AQ9BRX8 229 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 TBC1D17Q9HA65 648 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 KBTBD4Q9NVX7 518 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 DPP3Q9NY33 737 aa20.51■□□□□ 0.87
VARS-220ENST00000461874 CUTAO60888 179 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 ZSCAN22P10073 491 aaPredicted RBP20.5■□□□□ 0.87
VARS-220ENST00000461874 GARTP22102 1010 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 CYP4A22Q5TCH4 519 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 IQCEQ6IPM2 695 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 PHLDB3Q6NSJ2 640 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 PDZD4Q76G19 769 aaPredicted RBP20.5■□□□□ 0.87
VARS-220ENST00000461874 NT5DC4Q86YG4 428 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 CCDC65Q8IXS2 484 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 EFCAB13Q8IY85 973 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 CCDC105Q8IYK2 499 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 SYCP3Q8IZU3 236 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 ZSWIM2Q8NEG5 633 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 PGLYRP2Q96PD5 576 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 LRRC27Q9C0I9 530 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 CUEDC2Q9H467 287 aa20.5■□□□□ 0.87
VARS-220ENST00000461874 ECI2O75521 394 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 CYP11A1P05108 521 aa20.49■□□□□ 0.87
VARS-220ENST00000461874 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms