RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 IZUMO3Q5VZ72 239 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 ICE2Q659A1 982 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 OR6B2Q6IFH4 312 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 FAM47EQ6ZV65 393 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 RHOT1Q8IXI2 618 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 DIS3Q9Y2L1 958 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 NCANO14594 1321 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 SPAG7O75391 227 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 ATP4AP20648 1035 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 P3H1Q32P28 736 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 BSPRYQ5W0U4 402 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 TAS1R3Q7RTX0 852 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 TMEM35BQ8NCS4 154 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 ARHGEF2Q92974 986 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 PORCNQ9H237 461 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 NGRNQ9NPE2 291 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 LYPLA2O95372 231 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 HSPA6P17066 643 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 NAMPTP43490 491 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 EEF1DP3Q658K8 133 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 CEP57Q86XR8 500 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 RFX6Q8HWS3 928 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 EPN3Q9H201 632 aa12.7□□□□□ -0.38
SMPD4-213ENST00000454468 GEMIN8Q9NWZ8 242 aaKnown RBP12.7□□□□□ -0.38
SMPD4-213ENST00000454468 ITGB3P05106 788 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 CLTAP09496 248 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 TCF4P15884 667 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 STX2P32856 288 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ZACNQ401N2 412 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 PNMA8AQ86V59 439 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 MIS12Q9H081 205 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 PABPC3Q9H361 631 aaKnown RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 MAP3K20Q9NYL2 800 aaKnown RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 A0A087WZ62 844 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 CHKAP35790 457 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ARSEP51690 589 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ZNF572Q7Z3I7 529 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 CHST13Q8NET6 341 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 MFSD14AQ96MC6 490 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RPS6KC1Q96S38 1066 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 FDXACB1Q9BRP7 624 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 CDC42EP4Q9H3Q1 356 aaKnown RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 PCDHA3Q9Y5H8 950 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 M0QYV0 167 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ARIH2O95376 493 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-213ENST00000454468 C11orf63Q6NUN7 778 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RASGEF1CQ8N431 466 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 RDM1Q8NG50 284 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 AGAP1Q9UPQ3 857 aa12.69□□□□□ -0.38
SMPD4-213ENST00000454468 ADCY3O60266 1144 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-213ENST00000454468 BBS9Q3SYG4 887 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 DUPD1Q68J44 220 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 TMEM192Q8IY95 271 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 ZDHHC14Q8IZN3 488 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 TMEM121Q9BTD3 319 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 ARHGAP28Q9P2N2 729 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 TMEM59LQ9UK28 342 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 MAGED2Q9UNF1 606 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-213ENST00000454468 HEY1Q9Y5J3 304 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 RNF8O76064 485 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 SLMAPQ14BN4 828 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 PSMD6Q15008 389 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 ENOSF1Q7L5Y1 443 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 TAOK1Q7L7X3 1001 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 ABRAQ8N0Z2 381 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 ANKS4BQ8N8V4 417 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 RUBCNQ92622 972 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 OPTNQ96CV9 577 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 PARVAQ9NVD7 372 aa12.68□□□□□ -0.38
SMPD4-213ENST00000454468 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms