RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 LMBRD2Q68DH5 695 aaPredicted RBP27.02■■□□□ 1.92
UFD1-204ENST00000447868 CMASQ8NFW8 434 aaPredicted RBP27.02■■□□□ 1.92
UFD1-204ENST00000447868 CACTINQ8WUQ7 758 aaKnown RBP27.02■■□□□ 1.92
UFD1-204ENST00000447868 KIAA1586Q9HCI6 787 aa27.02■■□□□ 1.92
UFD1-204ENST00000447868 RHOBTB3O94955 611 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 PNOCQ13519 176 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 SNRNP35Q16560 246 aaKnown RBP27.01■■□□□ 1.91
UFD1-204ENST00000447868 LIN9Q5TKA1 542 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 ZNF280DQ6N043 979 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 XXYLT1Q8NBI6 393 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 ENGASEQ8NFI3 743 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 KHSRPQ92945 711 aaKnown RBP eCLIP27.01■■□□□ 1.912e-12■■■□□ 15.4
UFD1-204ENST00000447868 SENP8Q96LD8 212 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 CGNQ9P2M7 1197 aaKnown RBP27.01■■□□□ 1.91
UFD1-204ENST00000447868 FBXL5Q9UKA1 691 aa27.01■■□□□ 1.91
UFD1-204ENST00000447868 LOC730098B7Z3J9 87 aa27■■□□□ 1.91
UFD1-204ENST00000447868 TBC1D4O60343 1298 aa27■■□□□ 1.91
UFD1-204ENST00000447868 ZMYND10O75800 440 aa27■■□□□ 1.91
UFD1-204ENST00000447868 ROR1Q01973 937 aa27■■□□□ 1.91
UFD1-204ENST00000447868 YWHAHQ04917 246 aaPredicted RBP27■■□□□ 1.91
UFD1-204ENST00000447868 SLC8B1Q6J4K2 584 aa27■■□□□ 1.91
UFD1-204ENST00000447868 C15orf39Q6ZRI6 1047 aa27■■□□□ 1.91
UFD1-204ENST00000447868 USP37Q86T82 979 aa27■■□□□ 1.91
UFD1-204ENST00000447868 ZDHHC7Q9NXF8 308 aa27■■□□□ 1.91
UFD1-204ENST00000447868 ITGB3P05106 788 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 C8AP07357 584 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 TMEM191BP0C7N4 346 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 ODC1P11926 461 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 POLR2BP30876 1174 aaKnown RBP26.99■■□□□ 1.91
UFD1-204ENST00000447868 TAF6P49848 677 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 C12orf56Q8IXR9 622 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 C1orf127Q8N9H9 656 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 GOLGA5Q8TBA6 731 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 SMG7Q92540 1137 aaKnown RBP26.99■■□□□ 1.91
UFD1-204ENST00000447868 ZNF707Q96C28 371 aaPredicted RBP26.99■■□□□ 1.91
UFD1-204ENST00000447868 MTMR12Q9C0I1 747 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 PIDD1Q9HB75 910 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 AGAP1Q9UPQ3 857 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 MAPK8IP1Q9UQF2 711 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 BDP1A6H8Y1 2624 aa26.99■■□□□ 1.91
UFD1-204ENST00000447868 PTPRJQ12913 1337 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 EXOC3O60645 756 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 GADD45BO75293 160 aaPredicted RBP26.98■■□□□ 1.91
UFD1-204ENST00000447868 KRT19P08727 400 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 KCNB1Q14721 858 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 SURF1Q15526 300 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 PPM1LQ5SGD2 360 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 CSGALNACT2Q8N6G5 542 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 SLC7A14Q8TBB6 771 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 ANKRD36BP1Q96IX9 119 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 PRKD2Q9BZL6 878 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 KCTD10Q9H3F6 313 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 NR2E1Q9Y466 385 aa26.98■■□□□ 1.91
UFD1-204ENST00000447868 WDR27A2RRH5 827 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 OAZ2O95190 189 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 DLATP10515 647 aaKnown RBP26.97■■□□□ 1.91
UFD1-204ENST00000447868 TYMPP19971 482 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 PAX3P23760 479 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 CYP24A1Q07973 514 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 SCARA3Q6AZY7 606 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 OVOS1Q6IE37 1185 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 RNF135Q8IUD6 432 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 OR5B17Q8NGF7 314 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 CCDC127Q96BQ5 260 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 ZNF560Q96MR9 790 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 INTS13Q9NVM9 706 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 ITGA11Q9UKX5 1188 aa26.97■■□□□ 1.91
UFD1-204ENST00000447868 CYB561D2O14569 222 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 CCL16O15467 120 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 TNNC2P02585 160 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 CPB1P15086 417 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 SV2CQ496J9 727 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 CCDC149Q6ZUS6 474 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 ZNF461Q8TAF7 563 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 EPHX3Q9H6B9 360 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 DENND4AQ7Z401 1863 aa26.96■■□□□ 1.91
UFD1-204ENST00000447868 KPNA7A9QM74 516 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 C2CD4DB7Z1M9 353 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 PDXKO00764 312 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 ABLIM3O94929 683 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 KIF20AO95235 890 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 ELF1P32519 619 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 PNPLA4P41247 253 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 BFSP1Q12934 665 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 PSMD6Q15008 389 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 CYP26C1Q6V0L0 522 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 WDR49Q8IV35 697 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 ERCC4Q92889 916 aaPredicted RBP26.95■■□□□ 1.9
UFD1-204ENST00000447868 TIGD1Q96MW7 591 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 FNBP1Q96RU3 617 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 POLIQ9UNA4 740 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 TSC2P49815 1807 aa26.95■■□□□ 1.9
UFD1-204ENST00000447868 ARHGEF37A1IGU5 675 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 PRRG1O14668 218 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 NR3C1P04150 777 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 HNRNPA1P09651 372 aaKnown RBP eCLIP26.94■■□□□ 1.9
UFD1-204ENST00000447868 OR4Q2P0C623 313 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 TNNI1P19237 187 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 RBP5P82980 135 aa26.94■■□□□ 1.9
UFD1-204ENST00000447868 DUOXA2Q1HG44 320 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms