RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ATP6V0A4Q9HBG4 840 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 RLIMQ9NVW2 624 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 POGKQ9P215 609 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLC45A2Q9UMX9 530 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 L1RE1Q9UN81 338 aa5.5□□□□□ -1.53
HMGB1P48-201ENST00000446155 NCANO14594 1321 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 FRMPD2Q68DX3 1309 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 CCDC78A2IDD5 438 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 MARCH11A6NNE9 402 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 B8ZZF3 427 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 APAF1O14727 1248 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZNF185O15231 689 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZBED1O96006 694 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 CENPBP07199 599 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 SMARCA1P28370 1054 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 KIF22Q14807 665 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 USP39Q53GS9 565 aaKnown RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM83BQ5T0W9 1011 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 ERAP2Q6P179 960 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 LRRC55Q6ZSA7 311 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 SRGAP1Q7Z6B7 1085 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 PDSS2Q86YH6 399 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 FITM2Q8N6M3 262 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 CACTINQ8WUQ7 758 aaKnown RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 TTC17Q96AE7 1141 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 MRGPRX1Q96LB2 322 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 DCLRE1CQ96SD1 692 aaKnown RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 TEX101Q9BY14 249 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 DDX21Q9NR30 783 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZDHHC8Q9ULC8 765 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM50BQ9Y247 325 aa5.49□□□□□ -1.53
HMGB1P48-201ENST00000446155 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 CDHR4A6H8M9 788 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 H3BUI4 141 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 PRRG2O14669 202 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 TPP1O14773 563 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 ANXA1P04083 346 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 ADRB1P08588 477 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NR4A1P22736 598 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 RNASE9P60153 205 aaKnown RBP5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NOMO3P69849 1222 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 TMEM95Q3KNT9 176 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 PDCD4Q53EL6 469 aaKnown RBP5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NOMO2Q5JPE7 1267 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 CELF5Q8N6W0 485 aaKnown RBP5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 KLHL32Q96NJ5 620 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NT5C1BQ96P26 610 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 GPR35Q9HC97 309 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 SORCS3Q9UPU3 1222 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
HMGB1P48-201ENST00000446155 NPHP1O15259 732 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 TCEA3O75764 348 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 AGFG2O95081 481 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 AHSGP02765 367 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 C1SP09871 688 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 FCER1AP12319 257 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 RHCEP18577 417 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 SERPINB3P29508 390 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 IRX6P78412 446 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 GPSM2P81274 684 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM189BP81408 668 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 RHDQ02161 417 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 TCF15Q12870 199 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 FGL2Q14314 439 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 MAEAQ7L5Y9 396 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 GDF7Q7Z4P5 450 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 DAAM2Q86T65 1068 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 SH2D3CQ8N5H7 860 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 ENAHQ8N8S7 591 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 TMIEQ8NEW7 156 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 MYRIPQ8NFW9 859 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 MTFMTQ96DP5 389 aaKnown RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 SLC46A2Q9BY10 475 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 C22orf23Q9BZE7 217 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZNF768Q9H5H4 540 aaKnown RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 FAM204AQ9H8W3 233 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 ZMAT3Q9HA38 289 aaKnown RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 VSX1Q9NZR4 365 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 BCCIPQ9P287 314 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 DKK2Q9UBU2 259 aa5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 EIF2B4Q9UI10 523 aaKnown RBP5.47□□□□□ -1.53
HMGB1P48-201ENST00000446155 GAGE12BA1L429 117 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 CAPN8A6NHC0 703 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 E9PLN8 166 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 TBX3O15119 743 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 PMM2O15305 246 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 FRS3O43559 492 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 PEX11BO96011 259 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 GJB1P08034 283 aa5.46□□□□□ -1.54
HMGB1P48-201ENST00000446155 ELANEP08246 267 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms