RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PHGDHO43175 533 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 ANXA1P04083 346 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 ELANEP08246 267 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 KITP10721 976 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 FCER1AP12319 257 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 NR4A1P22736 598 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZFP36P26651 326 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 SOX8P57073 446 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 PSMC1P62191 440 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 FAM193AP78312 1265 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 MAP9Q49MG5 647 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 COBLL1Q53SF7 1204 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 DARS2Q6PI48 645 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 GDF7Q7Z4P5 450 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 C1orf210Q8IVY1 113 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 OR56A1Q8NGH5 318 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 TTC17Q96AE7 1141 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 MTFMTQ96DP5 389 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 AURKAIP1Q9NWT8 199 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 TRPM5Q9NZQ8 1165 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 CFAP97Q9P2B7 532 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 HSFX1Q9UBD0 423 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 A0A1W2PPL8 197 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF785A8K8V0 405 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 MYO1FO00160 1098 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 GOLIM4O00461 696 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 FAM20BO75063 409 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 RPS6KA4O75676 772 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 SCAF4O95104 1147 aaKnown RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 GNAI3P08754 354 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 RARBP10826 455 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 MYF5P13349 255 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 ARFIP2P53365 341 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 CACNB3P54284 484 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 GNAI1P63096 354 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 PURAQ00577 322 aaKnown RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 NRN1LQ496H8 165 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 CRB2Q5IJ48 1285 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 CCSAPQ6IQ19 270 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 Q8NA96 180 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 PJA1Q8NG27 643 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 CPT1CQ8TCG5 803 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 LRTOMTQ8WZ04 291 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 SCAMP4Q969E2 229 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 LRIG1Q96JA1 1093 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 P2RX7Q99572 595 aaKnown RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZSWIM1Q9BR11 485 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 IMPG2Q9BZV3 1241 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 FAM50BQ9Y247 325 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 ATP11BQ9Y2G3 1177 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 PCDHGB6Q9Y5F9 930 aa5.68□□□□□ -1.5
HMGB3P6-201ENST00000444896 A0A1B0GTW7 788 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 FRS3O43559 492 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 DNAJB5O75953 348 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 C1SP09871 688 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLC5A1P13866 664 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 FGFR4P22455 802 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 OCA2Q04671 838 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 HABP2Q14520 560 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 SAFBQ15424 915 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 AOPEPQ8N6M6 819 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 PDPRQ8NCN5 879 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF341Q9BYN7 854 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 TRIM54Q9BYV2 358 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 CHST12Q9NRB3 414 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLC52A1Q9NWF4 448 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 PIH1D1Q9NWS0 290 aaKnown RBP5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 DKK2Q9UBU2 259 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 MED16Q9Y2X0 877 aa5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P6-201ENST00000444896 C1QTNF3-AMACRE9PGA6 284 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 TBX3O15119 743 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 MYL1P05976 194 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 PEX2P28328 305 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF135P52742 658 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 DGCR2P98153 550 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 TCF15Q12870 199 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 POLD3Q15054 466 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 B3GNTL1Q67FW5 361 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 RNF207Q6ZRF8 634 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 USP37Q86T82 979 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 CFAP52Q8N1V2 620 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF483Q8TF39 744 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 APIPQ96GX9 242 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 PNKPQ96T60 521 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 APOL5Q9BWW9 433 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLC46A2Q9BY10 475 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 DPH1Q9BZG8 443 aa5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 REXO4Q9GZR2 422 aaKnown RBP5.66□□□□□ -1.5
HMGB3P6-201ENST00000444896 CNNM1Q9NRU3 951 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms