RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GAP43P17677 238 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 TKTP29401 623 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 CDC25AP30304 524 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 LRPAP1P30533 357 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 YWHAHQ04917 246 aaPredicted RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 MAPK7Q13164 816 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ALCAMQ13740 583 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 STXBP4Q6ZWJ1 553 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 PDZD4Q76G19 769 aaPredicted RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 NT5DC4Q86YG4 428 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 THEM5Q8N1Q8 247 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 DDX12PQ92771 950 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ZSCAN16Q9H4T2 348 aaPredicted RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 ASB7Q9H672 318 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 POLD4Q9HCU8 107 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 HSFX1Q9UBD0 423 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ZMYM5Q9UJ78 669 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 TBX20Q9UMR3 447 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ASB3Q9Y575 518 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 NUMBLQ9Y6R0 609 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 K7ENM7 598 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 HNRNPDLO14979 420 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 OAZ2O95190 189 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 LDHAP00338 332 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 PDGFBP01127 241 aaPredicted RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 MYBP10242 640 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 CPB1P15086 417 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 TYMPP19971 482 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 BRCC3P46736 316 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ALDH1A3P47895 512 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 EPHB3P54753 998 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ARPP19P56211 112 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 STARD6P59095 220 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ROR1Q01973 937 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 MYBPC2Q14324 1141 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 SLC10A6Q3KNW5 377 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 SLC44A4Q53GD3 710 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 CCDC73Q6ZRK6 1079 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 SV2BQ7L1I2 683 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ITIH5Q86UX2 942 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 CACTINQ8WUQ7 758 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 LARP4BQ92615 738 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 RAD54LQ92698 747 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 FGF13Q92913 245 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ELSPBP1Q96BH3 223 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 MSANTD3Q96H12 275 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 INTS4Q96HW7 963 aaKnown RBP8.45□□□□□ -1.06
CD44-211ENST00000442151 IER2Q9BTL4 223 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 MSTO1Q9BUK6 570 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ST6GALNAC4Q9H4F1 302 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 TBC1D17Q9HA65 648 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ZFP14Q9HCL3 533 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 CA14Q9ULX7 337 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 USP20Q9Y2K6 914 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 PIEZO1Q92508 2521 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 DENND4AQ7Z401 1863 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 KANSL1LA0AUZ9 987 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 M0QZQ0 153 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 IL18RAPO95256 599 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 RHOP08100 348 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 ODC1P11926 461 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 GLULP15104 373 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 NPR3P17342 541 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 TUFMP49411 452 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 ZNF131P52739 623 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 GTF2BQ00403 316 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 FOXK2Q01167 660 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 AMPD3Q01432 767 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 DHX8Q14562 1220 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 ANGPT1Q15389 498 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 RRAGBQ5VZM2 374 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 ZNF852Q6ZMS4 543 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 GPR152Q8TDT2 470 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 C2orf15Q8WU43 125 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 DEPDC1BQ8WUY9 529 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 DNASE1L2Q92874 299 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 SECISBP2LQ93073 1101 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 EXOC4Q96A65 974 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 ZBTB45Q96K62 511 aaPredicted RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 PLIN2Q99541 437 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 ASAH2Q9NR71 780 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 DNMT3BQ9UBC3 853 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 FBXL5Q9UKA1 691 aa8.44□□□□□ -1.06
CD44-211ENST00000442151 SRPRBQ9Y5M8 271 aaKnown RBP8.44□□□□□ -1.06
CD44-211ENST00000442151 A0A0B4J269 797 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 TTC26A0AVF1 554 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 VPS37CA5D8V6 355 aaPredicted RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 KIAA0391O15091 583 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 ADAM12O43184 909 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 NARSO43776 548 aaKnown RBP8.43□□□□□ -1.06
CD44-211ENST00000442151 TBC1D4O60343 1298 aa8.43□□□□□ -1.06
CD44-211ENST00000442151 N4BP1O75113 896 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms