RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SCAMP4Q969E2 229 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 MARS2Q96GW9 593 aaKnown RBP6.14□□□□□ -1.43
PFDN4-202ENST00000441080 KLHL32Q96NJ5 620 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 TLR10Q9BXR5 811 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 ATP6V0A4Q9HBG4 840 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 PIH1D1Q9NWS0 290 aaKnown RBP6.14□□□□□ -1.43
PFDN4-202ENST00000441080 CEP72Q9P209 647 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 CDYLQ9Y232 598 aa6.14□□□□□ -1.43
PFDN4-202ENST00000441080 PRSS29PA6NIE9 313 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 B8ZZF3 427 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 PLSCR1O15162 318 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 MYL1P05976 194 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 KITP10721 976 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 NPR1P16066 1061 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 HDCP19113 662 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 PEX2P28328 305 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 ZNF135P52742 658 aaPredicted RBP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 PURAQ00577 322 aaKnown RBP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 APOA5Q6Q788 366 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 SH3RF3Q8TEJ3 882 aaPredicted RBP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 MRGPRX1Q96LB2 322 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 PNKPQ96T60 521 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 ZSWIM1Q9BR11 485 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 SARGQ9BW04 601 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 SLC46A2Q9BY10 475 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 TEX101Q9BY14 249 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 C22orf23Q9BZE7 217 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 BHMT2Q9H2M3 363 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 ZNF703Q9H7S9 590 aaPredicted RBP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 DDX21Q9NR30 783 aaKnown RBP eCLIP6.13□□□□□ -1.43
PFDN4-202ENST00000441080 TPCN1Q9ULQ1 816 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 FAM50BQ9Y247 325 aa6.13□□□□□ -1.43
PFDN4-202ENST00000441080 A0A1B0GTW7 788 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 MGEA5O60502 916 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 CHEK2O96017 543 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 TRIM27P14373 513 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 FGFR4P22455 802 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 SLC7A1P30825 629 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 HABP2Q14520 560 aaPredicted RBP6.12□□□□□ -1.43
PFDN4-202ENST00000441080 POLD3Q15054 466 aaPredicted RBP6.12□□□□□ -1.43
PFDN4-202ENST00000441080 COBLL1Q53SF7 1204 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 FOXR2Q6PJQ5 311 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 AATKQ6ZMQ8 1374 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 MAPKAPK5Q8IW41 473 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 IL31RAQ8NI17 732 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 PLEKHG4BQ96PX9 1271 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 GPR20Q99678 358 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 ZNF768Q9H5H4 540 aaKnown RBP6.12□□□□□ -1.43
PFDN4-202ENST00000441080 USP25Q9UHP3 1055 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 PCDHGB6Q9Y5F9 930 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.12□□□□□ -1.43
PFDN4-202ENST00000441080 FPGT-TNNI3KV9GXZ4 949 aa6.12□□□□□ -1.43
PFDN4-202ENST00000441080 RNASET2O00584 256 aaKnown RBP6.11□□□□□ -1.43
PFDN4-202ENST00000441080 FRS3O43559 492 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 NCR1O76036 304 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 GPANK1O95872 356 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 ADRB1P08588 477 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 C1SP09871 688 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 HSD11B2P80365 405 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 FAM189BP81408 668 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 SLC25A3Q00325 362 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 OCA2Q04671 838 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 PIGFQ07326 219 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 SEMA5AQ13591 1074 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 CRB2Q5IJ48 1285 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 DDX17Q92841 729 aaKnown RBP6.11□□□□□ -1.43
PFDN4-202ENST00000441080 P2RX7Q99572 595 aaKnown RBP6.11□□□□□ -1.43
PFDN4-202ENST00000441080 TINAGL1Q9GZM7 467 aaPredicted RBP6.11□□□□□ -1.43
PFDN4-202ENST00000441080 ARNT2Q9HBZ2 717 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 AKIP1Q9NQ31 210 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 RNF181Q9P0P0 153 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.11□□□□□ -1.43
PFDN4-202ENST00000441080 HSFX1Q9UBD0 423 aa6.11□□□□□ -1.43
PFDN4-202ENST00000441080 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 CCDC78A2IDD5 438 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 C1QTNF3-AMACRE9PGA6 284 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 E9PLN8 166 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 M0QYG6 137 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 ERN1O75460 977 aaKnown RBP6.1□□□□□ -1.43
PFDN4-202ENST00000441080 MXRA7P84157 204 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 SAFBQ15424 915 aaKnown RBP eCLIP6.1□□□□□ -1.43
PFDN4-202ENST00000441080 LRRC55Q6ZSA7 311 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 USP37Q86T82 979 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 CFAP52Q8N1V2 620 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 CACTINQ8WUQ7 758 aaKnown RBP6.1□□□□□ -1.43
PFDN4-202ENST00000441080 SLC25A43Q8WUT9 341 aaPredicted RBP6.1□□□□□ -1.43
PFDN4-202ENST00000441080 KBTBD7Q8WVZ9 684 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 ANKS1AQ92625 1134 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 MED15Q96RN5 788 aa6.1□□□□□ -1.43
PFDN4-202ENST00000441080 SMOQ99835 787 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms