RNA–Protein interactions for RNA: ENST00000438912.1

RBM6-208, Transcript of RNA binding motif protein 6, human

TSL 5

Gene RBM6, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM6-208	ENST00000438912	TMPRSS5	Q9H3S3	457 aa		5.09	□□□□□ -1.59
RBM6-208	ENST00000438912	TFCP2L1	Q9NZI6	479 aa		5.09	□□□□□ -1.59
RBM6-208	ENST00000438912	USP36	Q9P275	1121 aa	Known RBP	5.09	□□□□□ -1.59
RBM6-208	ENST00000438912	PUF60	Q9UHX1	559 aa	Known RBP	5.09	□□□□□ -1.59
RBM6-208	ENST00000438912	TAF1L	Q8IZX4	1826 aa		5.09	□□□□□ -1.6
RBM6-208	ENST00000438912	UBR2	Q8IWV8	1755 aa		5.09	□□□□□ -1.6
RBM6-208	ENST00000438912	HEG1	Q9ULI3	1381 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	ERC2	O15083	957 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CTNND1	O60716	968 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	PRPF6	O94906	941 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	A1BG	P04217	495 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	LPO	P22079	712 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CCT2	P78371	535 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	ADCY2	Q08462	1091 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	PICALM	Q13492	652 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	GRM3	Q14832	879 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	UAP1L1	Q3KQV9	507 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	COBLL1	Q53SF7	1204 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	RRP12	Q5JTH9	1297 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	IL31	Q6EBC2	164 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CATIP	Q7Z7H3	387 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	PHYKPL	Q8IUZ5	450 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	GRAMD1C	Q8IYS0	662 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	GPR135	Q8IZ08	494 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	AIFM3	Q96NN9	605 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	OR14A2	Q96R54	314 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	DEF6	Q9H4E7	631 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	MTG2	Q9H4K7	406 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CHST12	Q9NRB3	414 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	SAE1	Q9UBE0	346 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	SRP68	Q9UHB9	627 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	DDX20	Q9UHI6	824 aa	Known RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	TSPYL4	Q9UJ04	414 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	DENND2A	Q9ULE3	1009 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	ZBTB1	Q9Y2K1	713 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	USP16	Q9Y5T5	823 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CASZ1	Q86V15	1759 aa		5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	COL5A3	P25940	1745 aa	Predicted RBP	5.08	□□□□□ -1.6
RBM6-208	ENST00000438912	CCER2	I3L3R5	266 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	ELL2	O00472	640 aa	Predicted RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	RAD17	O75943	681 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	LDHA	P00338	332 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	AGXT	P21549	392 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	C5AR1	P21730	350 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	MANF	P55145	182 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	EIF4A1	P60842	406 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	ATP2C1	P98194	919 aa	Predicted RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	PURA	Q00577	322 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	LMOD3	Q0VAK6	560 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	ZNF267	Q14586	743 aa	Predicted RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	DGKD	Q16760	1214 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	KLHDC10	Q6PID8	442 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	KANSL1	Q7Z3B3	1105 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	NKD2	Q969F2	451 aa	Predicted RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	DYDC2	Q96IM9	177 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	AGO3	Q9H9G7	860 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	KCMF1	Q9P0J7	381 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	DPP7	Q9UHL4	492 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	USP25	Q9UHP3	1055 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	DNAI1	Q9UI46	699 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	PPP2R3B	Q9Y5P8	575 aa		5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	RBM8A	Q9Y5S9	174 aa	Known RBP	5.07	□□□□□ -1.6
RBM6-208	ENST00000438912	KDM3B	Q7LBC6	1761 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	MYH14	Q7Z406	1995 aa	Known RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	PRSS38	A1L453	326 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	C2orf78	A6NCI8	922 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	CHL1	O00533	1208 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	NDUFS2	O75306	463 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	RPS6KA4	O75676	772 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	EIF3J	O75822	258 aa	Known RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	ANXA1	P04083	346 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SNRPA1	P09661	255 aa	Known RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	MTHFD2	P13995	350 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	TRIM27	P14373	513 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	EIF2S2	P20042	333 aa	Known RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SELENOP	P49908	381 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	NEK3	P51956	506 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SLC5A3	P53794	718 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	LGALS4	P56470	323 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	CDK17	Q00537	523 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.06	□□□□□ -1.6	5e-6	■□□□□ 8.5
RBM6-208	ENST00000438912	PITRM1	Q5JRX3	1037 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	ZBTB41	Q5SVQ8	909 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	KIAA1841	Q6NSI8	718 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SMC5	Q8IY18	1101 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	CAMKK1	Q8N5S9	505 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	NGEF	Q8N5V2	710 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SAMD3	Q8N6K7	520 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	TSPYL6	Q8N831	410 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SLC35G2	Q8TBE7	412 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	RPGR	Q92834	1020 aa	Known RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	RAX2	Q96IS3	184 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	SARG	Q9BW04	601 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	KCTD10	Q9H3F6	313 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	MAN1C1	Q9NR34	630 aa		5.06	□□□□□ -1.6
RBM6-208	ENST00000438912	C1orf112	Q9NSG2	853 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms