RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RGS16O15492 202 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SNX2O60749 519 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ATP5HO75947 161 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SHBGP04278 402 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 VIMP08670 466 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 RPSAP08865 295 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 FERP16591 822 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ATP2A2P16615 1042 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 GNAZP19086 355 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 RPS12P25398 132 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 PON1P27169 355 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SOX5P35711 763 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 PTGIRP43119 386 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 MSH2P43246 934 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 NAPAP54920 295 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SARNPP82979 210 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 DR1Q01658 176 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 MECOMQ03112 1051 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 AUHQ13825 339 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 EPHA7Q15375 998 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 TM4SF20Q53R12 229 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ANKRD20A2Q5SQ80 823 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ANKRD20A1Q5TYW2 823 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ANKRD20A3Q5VUR7 823 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 MZT2BQ6NZ67 158 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 TBC1D1Q86TI0 1168 aaPredicted RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 CCDC65Q8IXS2 484 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 OR8H2Q8N162 312 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 REXO1Q8N1G1 1221 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 PJA1Q8NG27 643 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SCFD1Q8WVM8 642 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 TBC1D20Q96BZ9 403 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 THOC1Q96FV9 657 aaKnown RBP8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SERPINB12Q96P63 405 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SIX2Q9NPC8 291 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ABCF3Q9NUQ8 709 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 MAFFQ9ULX9 164 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ARL2BPQ9Y2Y0 163 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 L3MBTL1Q9Y468 752 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 ACTL7BQ9Y614 415 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 TAF1P21675 1872 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
VTI1A-202ENST00000432306 PAPPA2Q9BXP8 1791 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 PDXKO00764 312 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 TRAFD1O14545 582 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 BACH1O14867 736 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 RIPK2O43353 540 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 PHF2O75151 1096 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 UNC5CO95185 931 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 NPTXRO95502 500 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 BAG3O95817 575 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 FGGP02679 453 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 AFPP02771 609 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 CLTAP09496 248 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 PECAM1P16284 738 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 VCAM1P19320 739 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 CTNNA2P26232 953 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ATP5DP30049 168 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 WEE1P30291 646 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 GCKP35557 465 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 MMP16P51512 607 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 RNASE9P60153 205 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 KCNJ2P63252 427 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 MRPS35P82673 323 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 KIF22Q14807 665 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 KRT72Q14CN4 511 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 EXOC3L4Q17RC7 722 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 SLC10A5Q5PT55 438 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 DCAF12L1Q5VU92 463 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 FBXO46Q6PJ61 603 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 LVRNQ6Q4G3 990 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 TRMT10CQ7L0Y3 403 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 EPM2AIP1Q7L775 607 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 KCNK18Q7Z418 384 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 MFN1Q8IWA4 741 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 BRSK2Q8IWQ3 736 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ENDOVQ8N8Q3 282 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 GLIS3Q8NEA6 775 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 SNX29Q8TEQ0 813 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 CKAP2Q8WWK9 683 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 JPH3Q8WXH2 748 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 NELL1Q92832 810 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ART4Q93070 314 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 PRMT1Q99873 361 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ELAC2Q9BQ52 826 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 TMEM47Q9BQJ4 181 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 SARGQ9BW04 601 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 MKNK2Q9HBH9 465 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ADAM22Q9P0K1 906 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 MTRF1LQ9UGC7 380 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 KIAA1024Q9UPX6 916 aa8.57□□□□□ -1.04
VTI1A-202ENST00000432306 BAZ2AQ9UIF9 1905 aaKnown RBP8.57□□□□□ -1.04
VTI1A-202ENST00000432306 LRRC37AA6NMS7 1700 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms