RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 E4F1Q66K89 784 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 SLC44A2Q8IWA5 706 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 SHCBP1Q8NEM2 672 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 ANKRD49Q8WVL7 239 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 KCNB2Q92953 911 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 RNF146Q9NTX7 359 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 NDUFS3O75489 264 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 CCZ1BP86790 482 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 CCZ1P86791 482 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 DNAJC3Q13217 504 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 KYNUQ16719 465 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 TTC39BQ5VTQ0 682 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
SEC16A-206ENST00000431893 RCOR2Q8IZ40 523 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 FEM1BQ9UK73 627 aa11.96□□□□□ -0.49
SEC16A-206ENST00000431893 USP1O94782 785 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 DSG1Q02413 1049 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 RNF149Q8NC42 400 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.5
SEC16A-206ENST00000431893 EEF2KO00418 725 aaKnown RBP11.96□□□□□ -0.5
SEC16A-206ENST00000431893 P4HBP07237 508 aaKnown RBP11.96□□□□□ -0.5
SEC16A-206ENST00000431893 PYGMP11217 842 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 ORC1Q13415 861 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 GRAPQ13588 217 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 GALNTL6Q49A17 601 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 FAM71DQ8N9W8 422 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.5
SEC16A-206ENST00000431893 SCN3BQ9NY72 215 aa11.96□□□□□ -0.5
SEC16A-206ENST00000431893 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.5
SEC16A-206ENST00000431893 ZNF197O14709 1029 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 PTPN7P35236 360 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 WDR72Q3MJ13 1102 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 NLGN1Q8N2Q7 840 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 NOD2Q9HC29 1040 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 NSMCE4AQ9NXX6 385 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 PIN4Q9Y237 131 aaKnown RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 CCND1P24385 295 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 QRICH1Q2TAL8 776 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 UNKQ9C0B0 810 aaKnown RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 FHOD1Q9Y613 1164 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 C3orf70A6NLC5 250 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 DEFA1P59665 94 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 DEFA3P59666 94 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 CDK17Q00537 523 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 GRM4Q14833 912 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ZC2HC1CQ53FD0 456 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ZRANB3Q5FWF4 1079 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 OTOAQ7RTW8 1153 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 OR8H2Q8N162 312 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 C10orf53Q8N6V4 93 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 APPL2Q8NEU8 664 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 EPS8L3Q8TE67 593 aaKnown RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 SLC39A10Q9ULF5 831 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 RSPH10B2B2RC85 870 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 CTSHP09668 335 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 HIST1H2AGP0C0S8 130 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 RSPH10BP0C881 870 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 HIST1H2ADP20671 130 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 KCNK10P57789 538 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 CIAPIN1Q6FI81 312 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 HIST1H2AHQ96KK5 128 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 HIST1H2AJQ99878 128 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 H2AFJQ9BTM1 129 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 METTL5Q9NRN9 209 aaKnown RBP11.95□□□□□ -0.5
SEC16A-206ENST00000431893 GPSM2P81274 684 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 DGKHQ86XP1 1220 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 UXS1Q8NBZ7 420 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ASAP3Q8TDY4 903 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 KAT2BQ92831 832 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 OPTNQ96CV9 577 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ARHGEF26Q96DR7 871 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 DTNBP1Q96EV8 351 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 ABCC2Q92887 1545 aa11.95□□□□□ -0.5
SEC16A-206ENST00000431893 RALAP11233 206 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 PDGFRAP16234 1089 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 MAGEA4P43358 317 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.54e-9■■■■■ 28.4
SEC16A-206ENST00000431893 MAPK10P53779 464 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 CCNI2Q6ZMN8 369 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SCFD1Q8WVM8 642 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 NSL1Q96IY1 281 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 SNX9Q9Y5X1 595 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 PVALEFA0A1B0GWK0 134 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 ECE2O60344 883 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 PDE5AO76074 875 aa11.94□□□□□ -0.5
SEC16A-206ENST00000431893 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms