RNA–Protein interactions for RNA: ENST00000430086.1

CCDC88A-206, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 3

Gene CCDC88A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-206ENST00000430086 GJB1P08034 283 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 MXRA7P84157 204 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 ZXDAP98168 799 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 TIGD2Q4W5G0 525 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 LCE5AQ5TCM9 118 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 EMC10Q5UCC4 262 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 FOXR2Q6PJQ5 311 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 OVCH2Q7RTZ1 564 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 PPP1R3BQ86XI6 285 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 CPEB3Q8NE35 698 aaKnown RBP7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 TTC8Q8TAM2 541 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 SCAMP4Q969E2 229 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 BOD1Q96IK1 185 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 MMRN2Q9H8L6 949 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 GPR35Q9HC97 309 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 HSFX1Q9UBD0 423 aa7.2□□□□□ -1.26
CCDC88A-206ENST00000430086 DDX6P26196 483 aaKnown RBP eCLIP7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 MCM7P33993 719 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 AGFG1P52594 562 aaKnown RBP7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 HSD11B2P80365 405 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 GFOD2Q3B7J2 385 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 SPDYE7PQ495Y7 208 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 ARHGEF19Q8IW93 802 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 SH2D3CQ8N5H7 860 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 TMIEQ8NEW7 156 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 BRIX1Q8TDN6 353 aaKnown RBP7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 ADAM2Q99965 735 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 TLR10Q9BXR5 811 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 TMEM60Q9H2L4 133 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 TMEM74BQ9NUR3 256 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 RNF181Q9P0P0 153 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 USP25Q9UHP3 1055 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 MAP3K2Q9Y2U5 619 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 PCDHA1Q9Y5I3 950 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 AATKQ6ZMQ8 1374 aa7.19□□□□□ -1.26
CCDC88A-206ENST00000430086 CENPVL1A0A0U1RR11 272 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 RARBP10826 455 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 RAB1AP62820 205 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 CXADRP78310 365 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 RESTQ13127 1097 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 ANO6Q4KMQ2 910 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 ARHGAP29Q52LW3 1261 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 LY6G5CQ5SRR4 150 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 C14orf80Q86SX3 495 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 DAAM2Q86T65 1068 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 Q8NA96 180 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 TNPO1Q92973 898 aaKnown RBP7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 FUBP1Q96AE4 644 aaKnown RBP7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 CHPF2Q9P2E5 772 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 NOX1Q9Y5S8 564 aa7.18□□□□□ -1.26
CCDC88A-206ENST00000430086 MYADML2A6NDP7 307 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 ABHD16AO95870 558 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 CHEK2O96017 543 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 ACVRL1P37023 503 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 POU6F2P78424 691 aaPredicted RBP7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 GPSM2P81274 684 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 ABHD18Q0P651 414 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 FGL2Q14314 439 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 GBX1Q14549 363 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 KCNV1Q6PIU1 500 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 PDPRQ8NCN5 879 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 SLC17A8Q8NDX2 589 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 PROKR1Q8TCW9 393 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 IMPG2Q9BZV3 1241 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 SARS2Q9NP81 518 aaKnown RBP7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 SLAMF7Q9NQ25 335 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 NEU2Q9Y3R4 380 aa7.17□□□□□ -1.26
CCDC88A-206ENST00000430086 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 VSTM5A8MXK1 200 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 E9PLN8 166 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 FAM227AF5H4B4 570 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 LPXNO60711 386 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 CDKL5O76039 1030 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 AHSGP02765 367 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 ADH4P08319 380 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 GUCY1B3Q02153 619 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 PIGFQ07326 219 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 ZNF844Q08AG5 666 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 TCF15Q12870 199 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 CYP2A13Q16696 494 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 NPNTQ6UXI9 565 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 USP51Q70EK9 711 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 WDR75Q8IWA0 830 aaKnown RBP7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 KIAA0319LQ8IZA0 1049 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 CFAP52Q8N1V2 620 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 DDX17Q92841 729 aaKnown RBP7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 VKORC1Q9BQB6 163 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 ALOXE3Q9BYJ1 711 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 SIK2Q9H0K1 926 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 ARMT1Q9H993 441 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 GALNT9Q9HCQ5 603 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 VSX1Q9NZR4 365 aaPredicted RBP7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 CDYLQ9Y232 598 aa7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 MTO1Q9Y2Z2 717 aaKnown RBP7.16□□□□□ -1.26
CCDC88A-206ENST00000430086 FOSP01100 380 aaPredicted RBP7.15□□□□□ -1.26
CCDC88A-206ENST00000430086 KCNA2P16389 499 aa7.15□□□□□ -1.26
CCDC88A-206ENST00000430086 ATF3P18847 181 aa7.15□□□□□ -1.26
CCDC88A-206ENST00000430086 PHKA1P46020 1223 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms