RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MRPL45Q9BRJ2 306 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 NAA15Q9BXJ9 866 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 TAS2R14Q9NYV8 317 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 CAPN11Q9UMQ6 739 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
HMGCLL1-206ENST00000428842 MYO15AQ9UKN7 3530 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 WDFY4Q6ZS81 3184 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 A0A1W2PQC6 194 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 LCHNA4D1U4 455 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TBKBP1A7MCY6 615 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 F8VZ95 297 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZNF263O14978 683 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 EVI5O60447 810 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ASPAP45381 313 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 PTK2Q05397 1052 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 C9orf57Q5W0N0 161 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 BCL7CQ8WUZ0 217 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 KCNN1Q92952 543 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ANKRD36BP1Q96IX9 119 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 HAUS4Q9H6D7 363 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 KIAA1586Q9HCI6 787 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 CNTN3Q9P232 1028 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 MYH10P35580 1976 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 B3GAT3O94766 335 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 KIF4AO95239 1232 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TNNC2P02585 160 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TNNT1P13805 278 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 AXLP30530 894 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 KCTD19Q17RG1 926 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TDRD12Q587J7 1177 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 HGSNATQ68CP4 663 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TAS1R1Q7RTX1 841 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM174Q8WUU8 243 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 SEPT8Q92599 483 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 RPS6KC1Q96S38 1066 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 BAG1Q99933 345 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 PACSIN1Q9BY11 444 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 RHOBTB2Q9BYZ6 727 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 SEPT11Q9NVA2 429 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 TBC1D13Q9NVG8 400 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 IMPACTQ9P2X3 320 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 ADAMTS1Q9UHI8 967 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 PUF60Q9UHX1 559 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 PAXBP1Q9Y5B6 917 aa10.22□□□□□ -0.77
HMGCLL1-206ENST00000428842 FNDC1Q4ZHG4 1894 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 THP07101 528 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 EIF4A3P38919 411 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 OR1G1P47890 313 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 MFSD5Q6N075 450 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 PDXDC1Q6P996 788 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 ZNF571Q7Z3V5 609 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 IRF2BP2Q7Z5L9 587 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 TNS4Q8IZW8 715 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 OLIG1Q8TAK6 271 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 TMEM209Q96SK2 561 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 FAM49BQ9NUQ9 324 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 COQ4Q9Y3A0 265 aa10.21□□□□□ -0.77
HMGCLL1-206ENST00000428842 OR4Q2P0C623 313 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 JAM2P57087 298 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 GSDMDP57764 484 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 SOWAHAQ2M3V2 549 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 CD300LGQ6UXG3 332 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 NOP9Q86U38 636 aaKnown RBP10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 SLC30A5Q8TAD4 765 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 TFAP2BQ92481 460 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 NT5C1BQ96P26 610 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 CERS4Q9HA82 394 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 CHST12Q9NRB3 414 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 CISHQ9NSE2 258 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 C1orf112Q9NSG2 853 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 TJP2Q9UDY2 1190 aa10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 REXO2Q9Y3B8 237 aaKnown RBP10.21□□□□□ -0.78
HMGCLL1-206ENST00000428842 DNAH14Q0VDD8 3507 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 A0A087X0T9 212 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 MAPK13O15264 365 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 ATMINO43313 823 aaPredicted RBP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 CXCL10P02778 98 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 MMEP08473 750 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 FAM228BP0C875 321 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 ACO1P21399 889 aaKnown RBP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 BRD2P25440 801 aaKnown RBP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 LILRA4P59901 499 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 WDR5P61964 334 aaKnown RBP10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 CUL2Q13617 745 aa10.2□□□□□ -0.78
HMGCLL1-206ENST00000428842 TIGD5Q53EQ6 642 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms