RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PRRG1O14668 218 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 SPTLC1O15269 473 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 ALCAMQ13740 583 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 PABPC1LQ4VXU2 614 aaKnown RBP23.34■■□□□ 1.33
CDCP1-202ENST00000425231 DSTYKQ6XUX3 929 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 CCDC65Q8IXS2 484 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 ZSWIM2Q8NEG5 633 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 ST13P5Q8NFI4 369 aaPredicted RBP23.34■■□□□ 1.33
CDCP1-202ENST00000425231 DHX58Q96C10 678 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 TRIM9Q9C026 710 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 AFF4Q9UHB7 1163 aaKnown RBP23.34■■□□□ 1.33
CDCP1-202ENST00000425231 KCNH3Q9ULD8 1083 aa23.34■■□□□ 1.33
CDCP1-202ENST00000425231 NHLH1Q02575 133 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 ADCY1Q08828 1119 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 ATL3Q6DD88 541 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 RNF19BQ6ZMZ0 732 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 IQUBQ8NA54 791 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 KCNG4Q8TDN1 519 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 OXCT2Q9BYC2 517 aaPredicted RBP23.33■■□□□ 1.33
CDCP1-202ENST00000425231 LRRC27Q9C0I9 530 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 MAFFQ9ULX9 164 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 PCDHA7Q9UN72 937 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 INSL5Q9Y5Q6 135 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 NUMBLQ9Y6R0 609 aa23.33■■□□□ 1.33
CDCP1-202ENST00000425231 PRPF6O94906 941 aaKnown RBP23.33■■□□□ 1.32
CDCP1-202ENST00000425231 LRG1P02750 347 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 RHOP08100 348 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 TYMPP19971 482 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 GARTP22102 1010 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 PAX3P23760 479 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 WNT7BP56706 349 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 EFCAB13Q8IY85 973 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 GLIS3Q8NEA6 775 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 FGF14Q92915 247 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 SENP8Q96LD8 212 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 PRRX2Q99811 253 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 FAM213AQ9BRX8 229 aa23.33■■□□□ 1.32
CDCP1-202ENST00000425231 RPP25Q9BUL9 199 aaKnown RBP23.33■■□□□ 1.32
CDCP1-202ENST00000425231 AVENQ9NQS1 362 aaPredicted RBP23.33■■□□□ 1.32
CDCP1-202ENST00000425231 SCN1AP35498 2009 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 SRFP11831 508 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 CPB1P15086 417 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 NPR3P17342 541 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 PTPN2P17706 415 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 SLC5A9Q2M3M2 681 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 CNNM4Q6P4Q7 775 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 PARM1Q6UWI2 310 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 USP37Q86T82 979 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 NPAS3Q8IXF0 933 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 SYCP3Q8IZU3 236 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 TMEM105Q8N8V8 129 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 HPS3Q969F9 1004 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 SAAL1Q96ER3 474 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 TMEM206Q9H813 350 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 DPP3Q9NY33 737 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 WNT16Q9UBV4 365 aa23.32■■□□□ 1.32
CDCP1-202ENST00000425231 IL18RAPO95256 599 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 VNN2O95498 520 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 CFHP08603 1231 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 OR4Q2P0C623 313 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 HOXD11P31277 338 aaPredicted RBP23.31■■□□□ 1.32
CDCP1-202ENST00000425231 AMPD3Q01432 767 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 DNM1Q05193 864 aaKnown RBP23.31■■□□□ 1.32
CDCP1-202ENST00000425231 TCF15Q12870 199 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 ASTLQ6HA08 431 aaPredicted RBP23.31■■□□□ 1.32
CDCP1-202ENST00000425231 OVOS1Q6IE37 1185 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 POTEHQ6S545 545 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 CBWD1Q9BRT8 395 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 MFSD1Q9H3U5 465 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 RCOR1Q9UKL0 485 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 FBXL21Q9UKT6 434 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 CFAP45Q9UL16 551 aa23.31■■□□□ 1.32
CDCP1-202ENST00000425231 MRPS23Q9Y3D9 190 aaKnown RBP23.31■■□□□ 1.32
CDCP1-202ENST00000425231 OR6C75A6NL08 312 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 POLR2DO15514 142 aaKnown RBP23.3■■□□□ 1.32
CDCP1-202ENST00000425231 LDHAP00338 332 aaKnown RBP23.3■■□□□ 1.32
CDCP1-202ENST00000425231 ODC1P11926 461 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 ME1P48163 572 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 CLCN5P51795 746 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 GPR17Q13304 367 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 CWF19L1Q69YN2 538 aaKnown RBP23.3■■□□□ 1.32
CDCP1-202ENST00000425231 NT5DC4Q86YG4 428 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 BRSK2Q8IWQ3 736 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 SIX5Q8N196 739 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 BORCS6Q96GS4 357 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 C7orf25Q9BPX7 421 aa23.3■■□□□ 1.32
CDCP1-202ENST00000425231 KRBA1A5PL33 1030 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 CYP11A1P05108 521 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 HOXD13P35453 343 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 NUBP1P53384 320 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 PRSS36Q5K4E3 855 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 ING5Q8WYH8 240 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 CORO1BQ9BR76 489 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 CRISPLD1Q9H336 500 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 CEP72Q9P209 647 aa23.29■■□□□ 1.32
CDCP1-202ENST00000425231 GOLGA8IPA6NC78 632 aa23.28■■□□□ 1.32
CDCP1-202ENST00000425231 GOLGA8JA6NMD2 632 aa23.28■■□□□ 1.32
CDCP1-202ENST00000425231 EXTL3O43909 919 aa23.28■■□□□ 1.32
CDCP1-202ENST00000425231 PTPN5P54829 565 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms