RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 C2orf71A6NGG8 1288 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 M0QZQ0 153 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 STX10O60499 249 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 TKTP29401 623 aaKnown RBP23.62■■□□□ 1.37
HMGA2-205ENST00000425208 MCCD1P59942 119 aaPredicted RBP23.62■■□□□ 1.37
HMGA2-205ENST00000425208 MYO1EQ12965 1108 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 TRPC3Q13507 836 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 TCEAL5Q5H9L2 206 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 C1orf220Q5T0J3 134 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 KIAA0319Q5VV43 1072 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 TDRD10Q5VZ19 366 aaKnown RBP23.62■■□□□ 1.37
HMGA2-205ENST00000425208 PDXDC1Q6P996 788 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 GPR65Q8IYL9 337 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 RIN2Q8WYP3 895 aaPredicted RBP23.62■■□□□ 1.37
HMGA2-205ENST00000425208 PCDHB8Q9UN66 801 aa23.62■■□□□ 1.37
HMGA2-205ENST00000425208 EYSQ5T1H1 3165 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 SYCE3A1L190 88 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 KPNA7A9QM74 516 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 SPTLC1O15269 473 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 SLC34A2O95436 690 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 C4BPAP04003 597 aaKnown RBP23.61■■□□□ 1.37
HMGA2-205ENST00000425208 GTF2H1P32780 548 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 CREMQ03060 361 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 ZACNQ401N2 412 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 C11orf57Q6ZUT1 292 aaPredicted RBP23.61■■□□□ 1.37
HMGA2-205ENST00000425208 ADGRD2Q7Z7M1 963 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 APPL2Q8NEU8 664 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 PIK3R5Q8WYR1 880 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 SENP8Q96LD8 212 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 EMILIN2Q9BXX0 1053 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 MMRN2Q9H8L6 949 aa23.61■■□□□ 1.37
HMGA2-205ENST00000425208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.61■■□□□ 1.37
HMGA2-205ENST00000425208 CCDC192P0DO97 292 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 ODC1P11926 461 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 GCLMP48507 274 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 PPP3CAQ08209 521 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 SV2AQ7L0J3 742 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 HPDLQ96IR7 371 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 DNAJC25Q9H1X3 360 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 TLE6Q9H808 572 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 TMEM8AQ9HCN3 771 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 TSC2P49815 1807 aa23.6■■□□□ 1.37
HMGA2-205ENST00000425208 LILRB3O75022 631 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CST3P01034 146 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 NRIP1P48552 1158 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 MARSP56192 900 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 NCOA4Q13772 614 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CCDC85BQ15834 202 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 PSMD5Q16401 504 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 KRT39Q6A163 491 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 SCARA3Q6AZY7 606 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 C15orf39Q6ZRI6 1047 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 ANKS3Q6ZW76 656 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 RBM23Q86U06 439 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 MAFAQ8NHW3 353 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CDCA3Q99618 268 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 FSD2A1L4K1 749 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CLSTN1O94985 981 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 ATICP31939 592 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 MXI1P50539 228 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 VARS2Q5ST30 1063 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 PRSS55Q6UWB4 352 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 FAM114A1Q8IWE2 563 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 LNX1Q8TBB1 728 aaPredicted RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 ENOX1Q8TC92 643 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 PPM1EQ8WY54 764 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 SLC35C1Q96A29 364 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CNOT6LQ96LI5 555 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 NAT10Q9H0A0 1025 aaKnown RBP23.59■■□□□ 1.37
HMGA2-205ENST00000425208 THAP9Q9H5L6 903 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 RXFP1Q9HBX9 757 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 DSEQ9UL01 958 aa23.59■■□□□ 1.37
HMGA2-205ENST00000425208 CYB561D2O14569 222 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 PER2O15055 1255 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 ADH1AP07327 375 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 CNPP09543 421 aaKnown RBP23.58■■□□□ 1.36
HMGA2-205ENST00000425208 TYMPP19971 482 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 PIK3CAP42336 1068 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 YWHAHQ04917 246 aaPredicted RBP23.58■■□□□ 1.36
HMGA2-205ENST00000425208 DUSP6Q16828 381 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 ZSCAN23Q3MJ62 389 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 GDAP2Q9NXN4 497 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 FNIP2Q9P278 1114 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 SNX9Q9Y5X1 595 aa23.58■■□□□ 1.36
HMGA2-205ENST00000425208 H7C4K7 107 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 VNN1O95497 513 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 STAU1O95793 577 aaKnown RBP23.57■■□□□ 1.36
HMGA2-205ENST00000425208 NDUFV1P49821 464 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 MYL6P60660 151 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 HYAL1Q12794 435 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 ZNF699Q32M78 642 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 ANO6Q4KMQ2 910 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 ZNF280DQ6N043 979 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 CREBRFQ8IUR6 639 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 TRIM59Q8IWR1 403 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 KLHL5Q96PQ7 755 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 IGFLR1Q9H665 355 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 MTRRQ9UBK8 725 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 NFE2L3Q9Y4A8 694 aa23.57■■□□□ 1.36
HMGA2-205ENST00000425208 TIMM13Q9Y5L4 95 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms