RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 UBR7Q8N806 425 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 BADQ92934 168 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 SLC38A7Q9NVC3 462 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 TBC1D13Q9NVG8 400 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 AIPL1Q9NZN9 384 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 DAAM1Q9Y4D1 1078 aa10.39□□□□□ -0.75
RIF1-202ENST00000414861 TSC2P49815 1807 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 F8W810 466 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 WEE2P0C1S8 567 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 ATICP31939 592 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 USP8P40818 1118 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 STAT1P42224 750 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 EPHB4P54760 987 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 ASIC2Q16515 512 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 NOMO2Q5JPE7 1267 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 FAM71AQ8IYT1 594 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 LRRC52Q8N7C0 313 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 CCDC112Q8NEF3 446 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 OLIG1Q8TAK6 271 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 TAF4BQ92750 862 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 SYN2Q92777 582 aaPredicted RBP10.38□□□□□ -0.75
RIF1-202ENST00000414861 BCO2Q9BYV7 579 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 ZMYND8Q9ULU4 1186 aaPredicted RBP10.38□□□□□ -0.75
RIF1-202ENST00000414861 CCDC85CA6NKD9 419 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 PODXLO00592 558 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 CYP26A1O43174 497 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 DDHD2O94830 711 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 UPP2O95045 317 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
RIF1-202ENST00000414861 CD58P19256 250 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 TBXAS1P24557 533 aaPredicted RBP10.38□□□□□ -0.75
RIF1-202ENST00000414861 CDH8P55286 799 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 UPP1Q16831 310 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 ENOSF1Q7L5Y1 443 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 CASD1Q96PB1 797 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
RIF1-202ENST00000414861 IL23AQ9NPF7 189 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 PRKAG2Q9UGJ0 569 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 HMGXB4Q9UGU5 601 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
RIF1-202ENST00000414861 KRT5P13647 590 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 CLCN1P35523 988 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 LILRA4P59901 499 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 WDR5P61964 334 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 PTK2Q05397 1052 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 DSC1Q08554 894 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 TUSC3Q13454 348 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 PAN2Q504Q3 1202 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 TDRD12Q587J7 1177 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 CYP26C1Q6V0L0 522 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 HAUS4Q9H6D7 363 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 CISHQ9NSE2 258 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ZNHIT6Q9NWK9 470 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 R3HCC1Q9Y3T6 440 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 SNX9Q9Y5X1 595 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ABHD14A-ACY1A0A1B0GW23 586 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 SERPING1P05155 500 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ITGB1P05556 798 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 EIF4A3P38919 411 aaKnown RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 PRKCIP41743 596 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 TAF6P49848 677 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 CDK17Q00537 523 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 FPGSQ05932 587 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 TMEM270Q6UE05 265 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 FAM43BQ6ZT52 329 aaPredicted RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 TOGARAM2Q6ZUX3 1019 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ZNF571Q7Z3V5 609 aaPredicted RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 SLC47A2Q86VL8 602 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ABI1Q8IZP0 508 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 C17orf53Q8N3J3 647 aaPredicted RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 URGCPQ8TCY9 931 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 HASPINQ8TF76 798 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 SLC20A1Q8WUM9 679 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ZNF560Q96MR9 790 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
RIF1-202ENST00000414861 DNAJB4Q9UDY4 337 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
RIF1-202ENST00000414861 LAMA3Q16787 3333 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 VWA8A3KMH1 1905 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 TBKBP1A7MCY6 615 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 ARHGAP6O43182 974 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 PFKMP08237 780 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 FERP16591 822 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 ZNF132P52740 706 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 TNNC1P63316 161 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 ORC1Q13415 861 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 CD300LGQ6UXG3 332 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 ZNF365Q70YC5 407 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 TMTC1Q8IUR5 882 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 COLGALT2Q8IYK4 626 aa10.36□□□□□ -0.75
RIF1-202ENST00000414861 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
RIF1-202ENST00000414861 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms