RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NNTQ13423 1086 aa26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 CAVIN3Q969G5 261 aa26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 ADPGKQ9BRR6 497 aa26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 FLRT1Q9NZU1 646 aa26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 NXF1Q9UBU9 619 aaKnown RBP26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 GNEQ9Y223 722 aaKnown RBP26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 MROH7Q68CQ1 1323 aa26.29■■□□□ 1.8
DNMT3A-206ENST00000406659 TRPM7Q96QT4 1865 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 HSPA6P17066 643 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ASPAP45381 313 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 C1QBPQ07021 282 aaKnown RBP26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ZNF667Q5HYK9 610 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ADAT2Q7Z6V5 191 aaKnown RBP26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 CPNE8Q86YQ8 564 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 AMACRQ9UHK6 382 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 MYO1FO00160 1098 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 RWDD2BP57060 319 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ZNF394Q53GI3 561 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 C2CD6Q53TS8 623 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 TLK2Q86UE8 772 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 C1orf127Q8N9H9 656 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ZBTB9Q96C00 473 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 MRPL47Q9HD33 250 aaKnown RBP26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 SIX4Q9UIU6 781 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 POLIQ9UNA4 740 aa26.28■■□□□ 1.8
DNMT3A-206ENST00000406659 ZNF865P0CJ78 1059 aaPredicted RBP26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 SMIM10L2AP0DMW4 78 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 SMIM10L2BP0DMW5 78 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 BRD2P25440 801 aaKnown RBP26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 CDC42EP1Q00587 391 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 KIZQ2M2Z5 673 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 OLFML2BQ68BL8 750 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 RGMBQ6NW40 437 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 AADACL2Q6P093 401 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 MMS22LQ6ZRQ5 1243 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 ACAP3Q96P50 834 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 FAM49AQ9H0Q0 323 aaPredicted RBP26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 MED4Q9NPJ6 270 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 PRDM10Q9NQV6 1147 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 NR2E1Q9Y466 385 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 NRCAMQ92823 1304 aa26.27■■□□□ 1.8
DNMT3A-206ENST00000406659 A0A1B0GUA9 196 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 LSM8O95777 96 aaKnown RBP26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 PYGMP11217 842 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 CYP2C19P33261 490 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 SLC1A1P43005 524 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 AARSP49588 968 aaKnown RBP eCLIP26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 CUL1Q13616 776 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 SLC10A6Q3KNW5 377 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 C17orf99Q6UX52 265 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 EIF1ADQ8N9N8 165 aaKnown RBP26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 GCOM2Q9BZD3 368 aaPredicted RBP26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 SCINQ9Y6U3 715 aa26.26■■□□□ 1.79
DNMT3A-206ENST00000406659 MEFVO15553 781 aaPredicted RBP26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 MGAMO43451 1857 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 F2P00734 622 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 ITGB3P05106 788 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 CYP2B6P20813 491 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 TMEM132DQ14C87 1099 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 LLGL2Q6P1M3 1020 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 APBB1IPQ7Z5R6 666 aaPredicted RBP26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 IFNL1Q8IU54 200 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.25■■□□□ 1.791e-8■■■■■ 66.3
DNMT3A-206ENST00000406659 USP6NLQ92738 828 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 FAXDC2Q96IV6 333 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 PLVAPQ9BX97 442 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 TRIM7Q9C029 511 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 ADAMTS10Q9H324 1103 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 DOCK3Q8IZD9 2030 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 FGFR4P22455 802 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 ATICP31939 592 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 RGS2P41220 211 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 MFSD10Q14728 455 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 CCL14Q16627 93 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 WDR72Q3MJ13 1102 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 TMEM35BQ8NCS4 154 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM71BQ8TC56 605 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 WHAMMQ8TF30 809 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 KAT2BQ92831 832 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 AP5M1Q9H0R1 490 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 GINS2Q9Y248 185 aa26.25■■□□□ 1.79
DNMT3A-206ENST00000406659 TTI1O43156 1089 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 INHBEP58166 350 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 PTP4A2Q12974 167 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 MAMLD1Q13495 774 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 HLTFQ14527 1009 aaKnown RBP eCLIP26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 TRADDQ15628 312 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 DCAF4L1Q3SXM0 396 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 PLEKHA7Q6IQ23 1121 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 LENG1Q96BZ8 264 aaPredicted RBP26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 BCO2Q9BYV7 579 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 PARVAQ9NVD7 372 aa26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 UTP11Q9Y3A2 253 aaKnown RBP26.24■■□□□ 1.79
DNMT3A-206ENST00000406659 BHMG1C9JSJ3 638 aaPredicted RBP26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 PROSCO94903 275 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CALB1P05937 261 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 LACTBP83111 547 aaPredicted RBP26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 TMEM62Q0P6H9 643 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 SAPCD2Q86UD0 394 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 ZNF518BQ9C0D4 1074 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms