RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ATP2B3Q16720 1220 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 TUBB8Q3ZCM7 444 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 NOMO2Q5JPE7 1267 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 TCTN3Q6NUS6 607 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 TSHZ1Q6ZSZ6 1077 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 MED25Q71SY5 747 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 FUKQ8N0W3 1084 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 OR6B3Q8NGW1 331 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 DEPTORQ8TB45 409 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 KLHL32Q96NJ5 620 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 VKORC1Q9BQB6 163 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 PNPLA8Q9NP80 782 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 GNL3LQ9NVN8 582 aaKnown RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 SIDT1Q9NXL6 827 aaKnown RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 PLA2G3Q9NZ20 509 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 JKAMPQ9P055 326 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 AFF4Q9UHB7 1163 aaKnown RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 OTOL1A6NHN0 477 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 PJA2O43164 708 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 TBC1D4O60343 1298 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 EIF3JO75822 258 aaKnown RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 KIF20AO95235 890 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 IL18RAPO95256 599 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 AMHP03971 560 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 CHRM3P20309 590 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 PPM1AP35813 382 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 MAPK10P53779 464 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 HTRA4P83105 476 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 DAG1Q14118 895 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 DHX8Q14562 1220 aaKnown RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 EMC10Q5UCC4 262 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 RRAGBQ5VZM2 374 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 EFCAB12Q6NXP0 572 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 GGT6Q6P531 493 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZNF783Q6ZMS7 281 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 GPRIN1Q7Z2K8 1008 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 PLEKHH3Q7Z736 793 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 FAM83AQ86UY5 434 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 MICU3Q86XE3 530 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 SP8Q8IXZ3 490 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 D2HGDHQ8N465 521 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC15A4Q8N697 577 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 OR10H5Q8NGA6 315 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 OR56A3Q8NH54 315 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 KBTBD7Q8WVZ9 684 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 STK31Q9BXU1 1019 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 TINAGL1Q9GZM7 467 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 SEC61A2Q9H9S3 476 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 VSX1Q9NZR4 365 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 CFAP97Q9P2B7 532 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZDHHC8Q9ULC8 765 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
HMGB1P17-201ENST00000403495 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 DRGXA6NNA5 263 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 LEFTY2O00292 366 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 APOL1O14791 398 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 GPR42O15529 346 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 PRICKLE3O43900 615 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 TCEA3O75764 348 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 FOSP01100 380 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 GNAI2P04899 355 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 GRPP07492 148 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 FCER1AP12319 257 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 UCP3P55916 312 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLFN5Q08AF3 891 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 TBC1D10BQ4KMP7 808 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 DCAF12L1Q5VU92 463 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 IZUMO3Q5VZ72 239 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 ANO1Q5XXA6 986 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLFN13Q68D06 897 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 SPTY2D1Q68D10 685 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC30A10Q6XR72 485 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 LCNL1Q6ZST4 164 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 USP37Q86T82 979 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 DPP9Q86TI2 863 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 FITM2Q8N6M3 262 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 DNAJC5GQ8N7S2 189 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 ENAHQ8N8S7 591 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 PDPRQ8NCN5 879 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 FAM46DQ8NEK8 389 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 ATXN2LQ8WWM7 1075 aaKnown RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 RAPGEF4Q8WZA2 1011 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 ST8SIA2Q92186 375 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 C18orf8Q96DM3 657 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 BORCS6Q96GS4 357 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 FMNL2Q96PY5 1086 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 NEU1Q99519 415 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 UNKQ9C0B0 810 aaKnown RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 WDR12Q9GZL7 423 aaKnown RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 NELFAQ9H3P2 528 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 STARD7Q9NQZ5 370 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 TBC1D23Q9NUY8 699 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZFR2Q9UPR6 939 aaKnown RBP4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 CDYLQ9Y232 598 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 AATKQ6ZMQ8 1374 aa4.74□□□□□ -1.65
HMGB1P17-201ENST00000403495 TRIM43BA6NCK2 446 aa4.73□□□□□ -1.65
HMGB1P17-201ENST00000403495 NPEPPSL1A6NEC2 478 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms