RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
VAMP1-202ENST00000396308 CENPFP49454 3210 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 ABHD14A-ACY1A0A1B0GW23 586 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 ARHGEF37A1IGU5 675 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 SOWAHDA6NJG2 315 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 ENPP3O14638 875 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 INPPL1O15357 1258 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 EVI5O60447 810 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 CCDC175P0C221 793 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 LRPAP1P30533 357 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 PRKCIP41743 596 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 KRT83P78385 493 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 TUSC3Q13454 348 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 NOMO2Q5JPE7 1267 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 XYLT2Q9H1B5 865 aa16.51■□□□□ 0.23
VAMP1-202ENST00000396308 NHEJ1Q9H9Q4 299 aaPredicted RBP16.51■□□□□ 0.23
VAMP1-202ENST00000396308 APOBEC3GQ9HC16 384 aaKnown RBP16.51■□□□□ 0.23
VAMP1-202ENST00000396308 ANO9A1A5B4 782 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 MEIS3P2A8K0S8 358 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 FOXN3O00409 490 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-202ENST00000396308 POMCP01189 267 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 AMHP03971 560 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 EIF4A3P38919 411 aaKnown RBP16.5■□□□□ 0.23
VAMP1-202ENST00000396308 PTK2Q05397 1052 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-202ENST00000396308 PPIGQ13427 754 aaKnown RBP eCLIP16.5■□□□□ 0.238e-7■■■□□ 14.9
VAMP1-202ENST00000396308 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 RTN4RL1Q86UN2 441 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-202ENST00000396308 FAM71AQ8IYT1 594 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 KAT5Q92993 513 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.5■□□□□ 0.23
VAMP1-202ENST00000396308 SCN1AP35498 2009 aa16.5■□□□□ 0.23
VAMP1-202ENST00000396308 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 GOLGA6L9A6NEM1 432 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 PODXLO00592 558 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 PIRO00625 290 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 BAIAP3O94812 1187 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 NDUFA10O95299 355 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 CD58P19256 250 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 ASPAP45381 313 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 KIF11P52732 1056 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 TTC3P53804 2025 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 GPNMBQ14956 572 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 FNDC1Q4ZHG4 1894 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-202ENST00000396308 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 C7orf61Q8IZ16 206 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-202ENST00000396308 TRIM43Q96BQ3 446 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-202ENST00000396308 CHP1Q99653 195 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 ARID3AQ99856 593 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 BCO2Q9BYV7 579 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 SEPT11Q9NVA2 429 aaKnown RBP16.49■□□□□ 0.23
VAMP1-202ENST00000396308 ARHGAP20Q9P2F6 1191 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 POLIQ9UNA4 740 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 SNX9Q9Y5X1 595 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 EPN1Q9Y6I3 576 aaPredicted RBP16.49■□□□□ 0.23
VAMP1-202ENST00000396308 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
VAMP1-202ENST00000396308 KPNA7A9QM74 516 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 HUS1O60921 280 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-202ENST00000396308 FGFR1P11362 822 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 CSF2RAP15509 400 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 TNFAIP3P21580 790 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 SOX4Q06945 474 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-202ENST00000396308 BMS1Q14692 1282 aaKnown RBP16.48■□□□□ 0.23
VAMP1-202ENST00000396308 E4F1Q66K89 784 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-202ENST00000396308 IRF2BP2Q7Z5L9 587 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 ZNF677Q86XU0 584 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 GPIHBP1Q8IV16 184 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 CXorf38Q8TB03 319 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 CXCL16Q9H2A7 254 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 GOLGA2P5Q9HBQ8 144 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 IL23AQ9NPF7 189 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 CISHQ9NSE2 258 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 RNF19AQ9NV58 838 aa16.48■□□□□ 0.23
VAMP1-202ENST00000396308 CASTOR2A6NHX0 329 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 ESPNB1AK53 854 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
VAMP1-202ENST00000396308 CYP26A1O43174 497 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 FPGSQ05932 587 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 CLLU1OSQ5K130 101 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 PRPF38BQ5VTL8 546 aaKnown RBP16.47■□□□□ 0.23
VAMP1-202ENST00000396308 HGSNATQ68CP4 663 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 RAD9BQ6WBX8 426 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 LRRC43Q8N309 656 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 GSTCDQ8NEC7 633 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 APPL2Q8NEU8 664 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms