RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 VCPIP1Q96JH7 1222 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 ERVK-5Q9HDB9 667 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 BHMG1C9JSJ3 638 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 DYNC1LI2O43237 492 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 ITGBL1O95965 494 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 KRT19P08727 400 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 WEE2P0C1S8 567 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 ZNF157P51786 506 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 POU5F1Q01860 360 aaKnown RBP19.39■□□□□ 0.69
ACTN4-202ENST00000390009 PPP2R5EQ16537 467 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 ZNF394Q53GI3 561 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 LIN9Q5TKA1 542 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 PPP1R2P3Q6NXS1 205 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 FAM71BQ8TC56 605 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 NMRK2Q9NPI5 230 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 SETD4Q9NVD3 440 aa19.39■□□□□ 0.69
ACTN4-202ENST00000390009 TTI1O43156 1089 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 TSPAN1O60635 241 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 ERLIN2O94905 339 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 FAM153BP0C7A2 387 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 PYGMP11217 842 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 TAF1CQ15572 869 aaPredicted RBP19.38■□□□□ 0.69
ACTN4-202ENST00000390009 FAM153CQ494X1 144 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 JADE1Q6IE81 842 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 ZNF410Q86VK4 478 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 C1orf127Q8N9H9 656 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 EIF1ADQ8N9N8 165 aaKnown RBP19.38■□□□□ 0.69
ACTN4-202ENST00000390009 CELF4Q9BZC1 486 aaKnown RBP19.38■□□□□ 0.69
ACTN4-202ENST00000390009 FAM153AQ9UHL3 310 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 SIX4Q9UIU6 781 aa19.38■□□□□ 0.69
ACTN4-202ENST00000390009 A6NJR5 290 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 MYO1FO00160 1098 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 HSPA6P17066 643 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 BRD2P25440 801 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 RWDD2BP57060 319 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 CUL1Q13616 776 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 MMS22LQ6ZRQ5 1243 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 TSEN2Q8NCE0 465 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 FLRT1Q9NZU1 646 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 NXF1Q9UBU9 619 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 POLIQ9UNA4 740 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 GNEQ9Y223 722 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 PCNTO95613 3336 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 TRIP11Q15643 1979 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 GOLGA6BA6NDN3 693 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 MANSC4A6NHS7 340 aaPredicted RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 RRN3P2A6NIE6 340 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 SYF2O95926 243 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 GGCXP38435 758 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 C1QBPQ07021 282 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 PTP4A2Q12974 167 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 KYAT1Q16773 422 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 SLC10A6Q3KNW5 377 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 WHAMMQ8TF30 809 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.37■□□□□ 0.695e-16■■■■■ 130.7
ACTN4-202ENST00000390009 ASB7Q9H672 318 aa19.37■□□□□ 0.69
ACTN4-202ENST00000390009 MRPL47Q9HD33 250 aaKnown RBP19.37■□□□□ 0.69
ACTN4-202ENST00000390009 A0A1B0GUA9 196 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 AGPSO00116 658 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 ITGB3P05106 788 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 ECHS1P30084 290 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 SLC1A1P43005 524 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 MAMLD1Q13495 774 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 IRF5Q13568 498 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 HLTFQ14527 1009 aaKnown RBP eCLIP19.36■□□□□ 0.69
ACTN4-202ENST00000390009 ZNF667Q5HYK9 610 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 PLEKHA7Q6IQ23 1121 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 VPS18Q9P253 973 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 FAN1Q9Y2M0 1017 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 F2P00734 622 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 GUCY2FP51841 1108 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 YWHAEP62258 255 aaKnown RBP19.36■□□□□ 0.69
ACTN4-202ENST00000390009 KIZQ2M2Z5 673 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 WDR72Q3MJ13 1102 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 SMYD5Q6GMV2 418 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 DDX42Q86XP3 938 aaKnown RBP eCLIP19.36■□□□□ 0.69
ACTN4-202ENST00000390009 TMEM130Q8N3G9 435 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 SCINQ9Y6U3 715 aa19.36■□□□□ 0.69
ACTN4-202ENST00000390009 PHF2O75151 1096 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 LSM8O95777 96 aaKnown RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 FGFR4P22455 802 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 MMP8P22894 467 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 GYS2P54840 703 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 FAM193AP78312 1265 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 KCTD19Q17RG1 926 aaPredicted RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 OLFML2BQ68BL8 750 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 TLK2Q86UE8 772 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 SLC13A5Q86YT5 568 aaPredicted RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 ZDHHC14Q8IZN3 488 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 CXorf38Q8TB03 319 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 RIN2Q8WYP3 895 aaPredicted RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 SEC14L1Q92503 715 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 LENG1Q96BZ8 264 aaPredicted RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 ADPGKQ9BRR6 497 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 BCO2Q9BYV7 579 aa19.35■□□□□ 0.69
ACTN4-202ENST00000390009 UTP11Q9Y3A2 253 aaKnown RBP19.35■□□□□ 0.69
ACTN4-202ENST00000390009 PROSCO94903 275 aa19.34■□□□□ 0.69
ACTN4-202ENST00000390009 SMIM10L2AP0DMW4 78 aa19.34■□□□□ 0.69
ACTN4-202ENST00000390009 SMIM10L2BP0DMW5 78 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms