RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 CACTINQ8WUQ7 758 aaKnown RBP3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 SLC25A43Q8WUT9 341 aaPredicted RBP3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 SCAMP4Q969E2 229 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 TSR2Q969E8 191 aaKnown RBP3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 SLC35A4Q96G79 324 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 PHACTR3Q96KR7 559 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 FBXO34Q9NWN3 711 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 TRPM5Q9NZQ8 1165 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 RNF181Q9P0P0 153 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 FZD1Q9UP38 647 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 CHST2Q9Y4C5 530 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 FPGT-TNNI3KV9GXZ4 949 aa3.52□□□□□ -1.85
RNU6-48P-201ENST00000384161 A0A087X1B8 175 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 A0A1B0GTW7 788 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 LRRC14BA6NHZ5 514 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 AHRRA9YTQ3 701 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 PRPF3O43395 683 aaKnown RBP3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 RPS6KA4O75676 772 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 AGFG2O95081 481 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 HRGP04196 525 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 ITGB1P05556 798 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 LAG3P18627 525 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 AGFG1P52594 562 aaKnown RBP3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 CACNB3P54284 484 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 PIGFQ07326 219 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 ZNF844Q08AG5 666 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 TUBA3CQ13748 450 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 PLS1Q14651 629 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 KIF22Q14807 665 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 TUBA3EQ6PEY2 450 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 C14orf80Q86SX3 495 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 ZBTB34Q8NCN2 500 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 OR56A1Q8NGH5 318 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 HAS1Q92839 578 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 TTC17Q96AE7 1141 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 LENG9Q96B70 501 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 MYEOVQ96EZ4 313 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 BOD1Q96IK1 185 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 MRPL46Q9H2W6 279 aaKnown RBP3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 GPR35Q9HC97 309 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 KLHL11Q9NVR0 708 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 OBP2AQ9NY56 170 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 GABBR1Q9UBS5 961 aa3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 USP15Q9Y4E8 981 aaPredicted RBP3.51□□□□□ -1.85
RNU6-48P-201ENST00000384161 CDHR4A6H8M9 788 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 MYADML2A6NDP7 307 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 CAPN8A6NHC0 703 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 VSTM5A8MXK1 200 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 GNAI2P04899 355 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 CFIP05156 583 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 THP07101 528 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 GJB1P08034 283 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 C1SP09871 688 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 SBK3P0C264 359 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 RARBP10826 455 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 SLC6A2P23975 617 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 SLC6A4P31645 630 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 INHBCP55103 352 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 KRTAP10-11P60412 298 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 POU6F2P78424 691 aaPredicted RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 LSM12Q3MHD2 195 aaKnown RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 PDCD4Q53EL6 469 aaKnown RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 KHDC1LQ5JSQ8 128 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 CHST15Q7LFX5 561 aaPredicted RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 OVCH2Q7RTZ1 564 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 DGKHQ86XP1 1220 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 MAPKAPK5Q8IW41 473 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 KIAA0319LQ8IZA0 1049 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 TMEM132CQ8N3T6 1108 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 SH2D3CQ8N5H7 860 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 TNPO1Q92973 898 aaKnown RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 AKIP1Q9NQ31 210 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 TMEM74BQ9NUR3 256 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 PIH1D1Q9NWS0 290 aaKnown RBP3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 KCNE5Q9UJ90 142 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 L1RE1Q9UN81 338 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 PAXBP1Q9Y5B6 917 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 NOX1Q9Y5S8 564 aa3.5□□□□□ -1.85
RNU6-48P-201ENST00000384161 FRMPD2Q68DX3 1309 aaPredicted RBP3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 TMEM200CA6NKL6 621 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 E7ENX8 843 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 ZNF185O15231 689 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 PHGDHO43175 533 aaKnown RBP3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 FRS3O43559 492 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 FAM20BO75063 409 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 SOAT2O75908 522 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 MATN4O95460 622 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 GPANK1O95872 356 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 ZBED1O96006 694 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 RPL17P18621 184 aaKnown RBP3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 MAKP20794 623 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 MCM7P33993 719 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 RAB1AP62820 205 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 NOMO3P69849 1222 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 FAM193AP78312 1265 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 BLOC1S1P78537 153 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 DGCR2P98153 550 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 SLC25A3Q00325 362 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 TAP2Q03519 686 aa3.49□□□□□ -1.85
RNU6-48P-201ENST00000384161 HABP2Q14520 560 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms